FastaValidator: an open-source Java library to parse and validate FASTA formatted sequences

BACKGROUND: Advances in sequencing technologies challenge the efficient importing and validation of FASTA formatted sequence data which is still a prerequisite for most bioinformatic tools and pipelines. Comparative analysis of commonly used Bio*-frameworks (BioPerl, BioJava and Biopython) shows tha...

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Detalles Bibliográficos
Autores principales: Waldmann, Jost, Gerken, Jan, Hankeln, Wolfgang, Schweer, Timmy, Glöckner, Frank Oliver
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4094456/
https://www.ncbi.nlm.nih.gov/pubmed/24929426
http://dx.doi.org/10.1186/1756-0500-7-365

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4094456/
https://www.ncbi.nlm.nih.gov/pubmed/24929426
http://dx.doi.org/10.1186/1756-0500-7-365

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