Sequence Alignment Tools: One Parallel Pattern to Rule Them All?

In this paper, we advocate high-level programming methodology for next generation sequencers (NGS) alignment tools for both productivity and absolute performance. We analyse the problem of parallel alignment and review the parallelisation strategies of the most popular alignment tools, which can all...

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Detalles Bibliográficos
Autores principales: Misale, Claudia, Ferrero, Giulio, Torquati, Massimo, Aldinucci, Marco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2014
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4131566/
https://www.ncbi.nlm.nih.gov/pubmed/25147803
http://dx.doi.org/10.1155/2014/539410

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4131566/
https://www.ncbi.nlm.nih.gov/pubmed/25147803
http://dx.doi.org/10.1155/2014/539410

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