A Rank-Based Sequence Aligner with Applications in Phylogenetic Analysis

Recent tools for aligning short DNA reads have been designed to optimize the trade-off between correctness and speed. This paper introduces a method for assigning a set of short DNA reads to a reference genome, under Local Rank Distance (LRD). The rank-based aligner proposed in this work aims to imp...

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Detalles Bibliográficos
Autores principales: Dinu, Liviu P., Ionescu, Radu Tudor, Tomescu, Alexandru I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4136772/
https://www.ncbi.nlm.nih.gov/pubmed/25133391
http://dx.doi.org/10.1371/journal.pone.0104006

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4136772/
https://www.ncbi.nlm.nih.gov/pubmed/25133391
http://dx.doi.org/10.1371/journal.pone.0104006

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