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A New Coarse-Grained Model for E. coli Cytoplasm: Accurate Calculation of the Diffusion Coefficient of Proteins and Observation of Anomalous Diffusion

A new coarse-grained model of the E. coli cytoplasm is developed by describing the proteins of the cytoplasm as flexible units consisting of one or more spheres that follow Brownian dynamics (BD), with hydrodynamic interactions (HI) accounted for by a mean-field approach. Extensive BD simulations we...

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Detalles Bibliográficos
Autores principales: Hasnain, Sabeeha, McClendon, Christopher L., Hsu, Monica T., Jacobson, Matthew P., Bandyopadhyay, Pradipta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4152264/
https://www.ncbi.nlm.nih.gov/pubmed/25180859
http://dx.doi.org/10.1371/journal.pone.0106466