Swarm: robust and fast clustering method for amplicon-based studies

Popular de novo amplicon clustering methods suffer from two fundamental flaws: arbitrary global clustering thresholds, and input-order dependency induced by centroid selection. Swarm was developed to address these issues by first clustering nearly identical amplicons iteratively using a local thresh...

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Detalles Bibliográficos
Autores principales: Mahé, Frédéric, Rognes, Torbjørn, Quince, Christopher, de Vargas, Colomban, Dunthorn, Micah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2014
Materias:
Biodiversity
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4178461/
https://www.ncbi.nlm.nih.gov/pubmed/25276506
http://dx.doi.org/10.7717/peerj.593

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4178461/
https://www.ncbi.nlm.nih.gov/pubmed/25276506
http://dx.doi.org/10.7717/peerj.593

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