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Considerations for accurate gene expression measurement by reverse transcription quantitative PCR when analysing clinical samples
Reverse transcription quantitative PCR is an established, simple and effective method for RNA measurement. However, technical standardisation challenges combined with frequent insufficient experimental detail render replication of many published findings challenging. Consequently, without adequate c...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4182594/ https://www.ncbi.nlm.nih.gov/pubmed/24858468 http://dx.doi.org/10.1007/s00216-014-7857-x |
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author | Sanders, Rebecca Mason, Deborah J. Foy, Carole A. Huggett, Jim F. |
author_facet | Sanders, Rebecca Mason, Deborah J. Foy, Carole A. Huggett, Jim F. |
author_sort | Sanders, Rebecca |
collection | PubMed |
description | Reverse transcription quantitative PCR is an established, simple and effective method for RNA measurement. However, technical standardisation challenges combined with frequent insufficient experimental detail render replication of many published findings challenging. Consequently, without adequate consideration of experimental standardisation, such findings may be sufficient for a given publication but cannot be translated to wider clinical application. This article builds on earlier standardisation work and the MIQE guidelines, discussing processes that need consideration for accurate, reproducible analysis when dealing with patient samples. By applying considerations common to the science of measurement (metrology), one can maximise the impact of gene expression studies, increasing the likelihood of their translation to clinical tools. [Figure: see text] |
format | Online Article Text |
id | pubmed-4182594 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-41825942014-10-06 Considerations for accurate gene expression measurement by reverse transcription quantitative PCR when analysing clinical samples Sanders, Rebecca Mason, Deborah J. Foy, Carole A. Huggett, Jim F. Anal Bioanal Chem Review Reverse transcription quantitative PCR is an established, simple and effective method for RNA measurement. However, technical standardisation challenges combined with frequent insufficient experimental detail render replication of many published findings challenging. Consequently, without adequate consideration of experimental standardisation, such findings may be sufficient for a given publication but cannot be translated to wider clinical application. This article builds on earlier standardisation work and the MIQE guidelines, discussing processes that need consideration for accurate, reproducible analysis when dealing with patient samples. By applying considerations common to the science of measurement (metrology), one can maximise the impact of gene expression studies, increasing the likelihood of their translation to clinical tools. [Figure: see text] Springer Berlin Heidelberg 2014-05-25 2014 /pmc/articles/PMC4182594/ /pubmed/24858468 http://dx.doi.org/10.1007/s00216-014-7857-x Text en © The Author(s) 2014 https://creativecommons.org/licenses/by/4.0/ Open Access This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. |
spellingShingle | Review Sanders, Rebecca Mason, Deborah J. Foy, Carole A. Huggett, Jim F. Considerations for accurate gene expression measurement by reverse transcription quantitative PCR when analysing clinical samples |
title | Considerations for accurate gene expression measurement by reverse transcription quantitative PCR when analysing clinical samples |
title_full | Considerations for accurate gene expression measurement by reverse transcription quantitative PCR when analysing clinical samples |
title_fullStr | Considerations for accurate gene expression measurement by reverse transcription quantitative PCR when analysing clinical samples |
title_full_unstemmed | Considerations for accurate gene expression measurement by reverse transcription quantitative PCR when analysing clinical samples |
title_short | Considerations for accurate gene expression measurement by reverse transcription quantitative PCR when analysing clinical samples |
title_sort | considerations for accurate gene expression measurement by reverse transcription quantitative pcr when analysing clinical samples |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4182594/ https://www.ncbi.nlm.nih.gov/pubmed/24858468 http://dx.doi.org/10.1007/s00216-014-7857-x |
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