bammds: a tool for assessing the ancestry of low-depth whole-genome data using multidimensional scaling (MDS)

Summary: We present bammds, a practical tool that allows visualization of samples sequenced by second-generation sequencing when compared with a reference panel of individuals (usually genotypes) using a multidimensional scaling algorithm. Our tool is aimed at determining the ancestry of unknown sam...

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Detalles Bibliográficos
Autores principales: Malaspinas, Anna-Sapfo, Tange, Ole, Moreno-Mayar, José Víctor, Rasmussen, Morten, DeGiorgio, Michael, Wang, Yong, Valdiosera, Cristina E., Politis, Gustavo, Willerslev, Eske, Nielsen, Rasmus
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184259/
https://www.ncbi.nlm.nih.gov/pubmed/24974206
http://dx.doi.org/10.1093/bioinformatics/btu410

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184259/
https://www.ncbi.nlm.nih.gov/pubmed/24974206
http://dx.doi.org/10.1093/bioinformatics/btu410

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