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Identification of a metabolic biomarker panel in rats for prediction of acute and idiosyncratic hepatotoxicity

It has been estimated that 10% of acute liver failure is due to “idiosyncratic hepatotoxicity”. The inability to identify such compounds with classical preclinical markers of hepatotoxicity has driven the need to discover a mechanism-based biomarker panel for hepatotoxicity. Seven compounds were inc...

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Autores principales: Sun, Jinchun, Slavov, Svetoslav, Schnackenberg, Laura K., Ando, Yosuke, Greenhaw, James, Yang, Xi, Salminen, William, Mendrick, Donna L., Beger, Richard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4204381/
https://www.ncbi.nlm.nih.gov/pubmed/25379137
http://dx.doi.org/10.1016/j.csbj.2014.08.001
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author Sun, Jinchun
Slavov, Svetoslav
Schnackenberg, Laura K.
Ando, Yosuke
Greenhaw, James
Yang, Xi
Salminen, William
Mendrick, Donna L.
Beger, Richard
author_facet Sun, Jinchun
Slavov, Svetoslav
Schnackenberg, Laura K.
Ando, Yosuke
Greenhaw, James
Yang, Xi
Salminen, William
Mendrick, Donna L.
Beger, Richard
author_sort Sun, Jinchun
collection PubMed
description It has been estimated that 10% of acute liver failure is due to “idiosyncratic hepatotoxicity”. The inability to identify such compounds with classical preclinical markers of hepatotoxicity has driven the need to discover a mechanism-based biomarker panel for hepatotoxicity. Seven compounds were included in this study: two overt hepatotoxicants (acetaminophen and carbon tetrachloride), two idiosyncratic hepatotoxicants (felbamate and dantrolene), and three non-hepatotoxicants (meloxicam, penicillin and metformin). Male Sprague–Dawley rats were orally gavaged with a single dose of vehicle, low dose or high dose of the compounds. At 6 h and 24 h post-dosing, blood was collected for metabolomics and clinical chemistry analyses, while organs were collected for histopathology analysis. Forty-one metabolites from previous hepatotoxicity studies were semi-quantified and were used to build models to predict hepatotoxicity. The selected metabolites were involved in various pathways, which have been noted to be linked to the underlying mechanisms of hepatotoxicity. PLS models based on all 41 metabolite or smaller subsets of 6 (6 h), 7 (24 h) and 20 (6 h and 24 h) metabolites resulted in models with an accuracy of at least 97.4% for the hold-out test set and 100% for training sets. When applied to the external test sets, the PLS models predicted that 1 of 9 rats at both 6 h and 24 h treated with idiosyncratic liver toxicants was exposed to a hepatotoxic chemical. In conclusion, the biomarker panel might provide information that along with other endpoint data (e.g., transcriptomics and proteomics) may diagnose acute and idiosyncratic hepatotoxicity in a clinical setting.
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spelling pubmed-42043812014-11-06 Identification of a metabolic biomarker panel in rats for prediction of acute and idiosyncratic hepatotoxicity Sun, Jinchun Slavov, Svetoslav Schnackenberg, Laura K. Ando, Yosuke Greenhaw, James Yang, Xi Salminen, William Mendrick, Donna L. Beger, Richard Comput Struct Biotechnol J Article It has been estimated that 10% of acute liver failure is due to “idiosyncratic hepatotoxicity”. The inability to identify such compounds with classical preclinical markers of hepatotoxicity has driven the need to discover a mechanism-based biomarker panel for hepatotoxicity. Seven compounds were included in this study: two overt hepatotoxicants (acetaminophen and carbon tetrachloride), two idiosyncratic hepatotoxicants (felbamate and dantrolene), and three non-hepatotoxicants (meloxicam, penicillin and metformin). Male Sprague–Dawley rats were orally gavaged with a single dose of vehicle, low dose or high dose of the compounds. At 6 h and 24 h post-dosing, blood was collected for metabolomics and clinical chemistry analyses, while organs were collected for histopathology analysis. Forty-one metabolites from previous hepatotoxicity studies were semi-quantified and were used to build models to predict hepatotoxicity. The selected metabolites were involved in various pathways, which have been noted to be linked to the underlying mechanisms of hepatotoxicity. PLS models based on all 41 metabolite or smaller subsets of 6 (6 h), 7 (24 h) and 20 (6 h and 24 h) metabolites resulted in models with an accuracy of at least 97.4% for the hold-out test set and 100% for training sets. When applied to the external test sets, the PLS models predicted that 1 of 9 rats at both 6 h and 24 h treated with idiosyncratic liver toxicants was exposed to a hepatotoxic chemical. In conclusion, the biomarker panel might provide information that along with other endpoint data (e.g., transcriptomics and proteomics) may diagnose acute and idiosyncratic hepatotoxicity in a clinical setting. Research Network of Computational and Structural Biotechnology 2014-08-09 /pmc/articles/PMC4204381/ /pubmed/25379137 http://dx.doi.org/10.1016/j.csbj.2014.08.001 Text en
spellingShingle Article
Sun, Jinchun
Slavov, Svetoslav
Schnackenberg, Laura K.
Ando, Yosuke
Greenhaw, James
Yang, Xi
Salminen, William
Mendrick, Donna L.
Beger, Richard
Identification of a metabolic biomarker panel in rats for prediction of acute and idiosyncratic hepatotoxicity
title Identification of a metabolic biomarker panel in rats for prediction of acute and idiosyncratic hepatotoxicity
title_full Identification of a metabolic biomarker panel in rats for prediction of acute and idiosyncratic hepatotoxicity
title_fullStr Identification of a metabolic biomarker panel in rats for prediction of acute and idiosyncratic hepatotoxicity
title_full_unstemmed Identification of a metabolic biomarker panel in rats for prediction of acute and idiosyncratic hepatotoxicity
title_short Identification of a metabolic biomarker panel in rats for prediction of acute and idiosyncratic hepatotoxicity
title_sort identification of a metabolic biomarker panel in rats for prediction of acute and idiosyncratic hepatotoxicity
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4204381/
https://www.ncbi.nlm.nih.gov/pubmed/25379137
http://dx.doi.org/10.1016/j.csbj.2014.08.001
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