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Heterogeneous Preferential Solvation of Water and Trifluoroethanol in Homologous Lysozymes
[Image: see text] Cytoplasmic osmolytes can significantly alter the thermodynamic and kinetic properties of proteins relative to those under dilute solution conditions. Spectroscopic experiments of lysozymes in cosolvents indicate that such changes may arise from the heterogeneous, site-specific hyd...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4216199/ https://www.ncbi.nlm.nih.gov/pubmed/24823618 http://dx.doi.org/10.1021/jp501132z |
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author | Arthur, Evan J. King, John T. Kubarych, Kevin J. Brooks, Charles L. |
author_facet | Arthur, Evan J. King, John T. Kubarych, Kevin J. Brooks, Charles L. |
author_sort | Arthur, Evan J. |
collection | PubMed |
description | [Image: see text] Cytoplasmic osmolytes can significantly alter the thermodynamic and kinetic properties of proteins relative to those under dilute solution conditions. Spectroscopic experiments of lysozymes in cosolvents indicate that such changes may arise from the heterogeneous, site-specific hydrophobic interactions between protein surface residues and individual solvent molecules. In pursuit of an accurate and predictive model for explaining biomolecular interactions, we study the averaged structural characteristics of mixed solvents with homologous lysozyme solutes using all-atom molecular dynamics. By observing the time-averaged densities of different aqueous solutions of trifluoroethanol, we deduce trends in the heterogeneous solvent interactions over each protein’s surface, and investigate how the homology of protein structure does not necessarily translate to similarities in solvent structure and composition—even when observing identical side chains. |
format | Online Article Text |
id | pubmed-4216199 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-42161992015-05-13 Heterogeneous Preferential Solvation of Water and Trifluoroethanol in Homologous Lysozymes Arthur, Evan J. King, John T. Kubarych, Kevin J. Brooks, Charles L. J Phys Chem B [Image: see text] Cytoplasmic osmolytes can significantly alter the thermodynamic and kinetic properties of proteins relative to those under dilute solution conditions. Spectroscopic experiments of lysozymes in cosolvents indicate that such changes may arise from the heterogeneous, site-specific hydrophobic interactions between protein surface residues and individual solvent molecules. In pursuit of an accurate and predictive model for explaining biomolecular interactions, we study the averaged structural characteristics of mixed solvents with homologous lysozyme solutes using all-atom molecular dynamics. By observing the time-averaged densities of different aqueous solutions of trifluoroethanol, we deduce trends in the heterogeneous solvent interactions over each protein’s surface, and investigate how the homology of protein structure does not necessarily translate to similarities in solvent structure and composition—even when observing identical side chains. American Chemical Society 2014-05-13 2014-07-17 /pmc/articles/PMC4216199/ /pubmed/24823618 http://dx.doi.org/10.1021/jp501132z Text en Copyright © 2014 American Chemical Society Terms of Use (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) |
spellingShingle | Arthur, Evan J. King, John T. Kubarych, Kevin J. Brooks, Charles L. Heterogeneous Preferential Solvation of Water and Trifluoroethanol in Homologous Lysozymes |
title | Heterogeneous Preferential
Solvation of Water and
Trifluoroethanol in Homologous Lysozymes |
title_full | Heterogeneous Preferential
Solvation of Water and
Trifluoroethanol in Homologous Lysozymes |
title_fullStr | Heterogeneous Preferential
Solvation of Water and
Trifluoroethanol in Homologous Lysozymes |
title_full_unstemmed | Heterogeneous Preferential
Solvation of Water and
Trifluoroethanol in Homologous Lysozymes |
title_short | Heterogeneous Preferential
Solvation of Water and
Trifluoroethanol in Homologous Lysozymes |
title_sort | heterogeneous preferential
solvation of water and
trifluoroethanol in homologous lysozymes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4216199/ https://www.ncbi.nlm.nih.gov/pubmed/24823618 http://dx.doi.org/10.1021/jp501132z |
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