Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms

BACKGROUND: Tools for high throughput sequencing and de novo assembly make the analysis of transcriptomes (i.e. the suite of genes expressed in a tissue) feasible for almost any organism. Yet a challenge for biologists is that it can be difficult to assign identities to gene sequences, especially fr...

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Detalles Bibliográficos
Autores principales: Speiser, Daniel I, Pankey, M Sabrina, Zaharoff, Alexander K, Battelle, Barbara A, Bracken-Grissom, Heather D, Breinholt, Jesse W, Bybee, Seth M, Cronin, Thomas W, Garm, Anders, Lindgren, Annie R, Patel, Nipam H, Porter, Megan L, Protas, Meredith E, Rivera, Ajna S, Serb, Jeanne M, Zigler, Kirk S, Crandall, Keith A, Oakley, Todd H
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4255452/
https://www.ncbi.nlm.nih.gov/pubmed/25407802
http://dx.doi.org/10.1186/s12859-014-0350-x

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4255452/
https://www.ncbi.nlm.nih.gov/pubmed/25407802
http://dx.doi.org/10.1186/s12859-014-0350-x

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