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Identifying Change Points in a Covariate Effect on Time-to-Event Analysis with Reduced Isotonic Regression

Isotonic regression is a useful tool to investigate the relationship between a quantitative covariate and a time-to-event outcome. The resulting non-parametric model is a monotonic step function of a covariate X and the steps can be viewed as change points in the underlying hazard function. However,...

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Detalles Bibliográficos
Autores principales: Ma, Yong, Lai, Yinglei, Lachin, John M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4256386/
https://www.ncbi.nlm.nih.gov/pubmed/25473827
http://dx.doi.org/10.1371/journal.pone.0113948
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author Ma, Yong
Lai, Yinglei
Lachin, John M.
author_facet Ma, Yong
Lai, Yinglei
Lachin, John M.
author_sort Ma, Yong
collection PubMed
description Isotonic regression is a useful tool to investigate the relationship between a quantitative covariate and a time-to-event outcome. The resulting non-parametric model is a monotonic step function of a covariate X and the steps can be viewed as change points in the underlying hazard function. However, when there are too many steps, over-fitting can occur and further reduction is desirable. We propose a reduced isotonic regression approach to allow combination of small neighboring steps that are not statistically significantly different. In this approach, a second stage, the reduction stage, is integrated into the usual monotonic step building algorithm by comparing the adjacent steps using appropriate statistical testing. This is achieved through a modified dynamic programming algorithm. We implemented the approach with the simple exponential distribution and then its extension, the Weibull distribution. Simulation studies are used to investigate the properties of the resulting isotonic functions. We apply this methodology to the Diabetes Control and Complication Trial (DCCT) data set to identify potential change points in the association between HbA1c and the risk of severe hypoglycemia.
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spelling pubmed-42563862014-12-11 Identifying Change Points in a Covariate Effect on Time-to-Event Analysis with Reduced Isotonic Regression Ma, Yong Lai, Yinglei Lachin, John M. PLoS One Research Article Isotonic regression is a useful tool to investigate the relationship between a quantitative covariate and a time-to-event outcome. The resulting non-parametric model is a monotonic step function of a covariate X and the steps can be viewed as change points in the underlying hazard function. However, when there are too many steps, over-fitting can occur and further reduction is desirable. We propose a reduced isotonic regression approach to allow combination of small neighboring steps that are not statistically significantly different. In this approach, a second stage, the reduction stage, is integrated into the usual monotonic step building algorithm by comparing the adjacent steps using appropriate statistical testing. This is achieved through a modified dynamic programming algorithm. We implemented the approach with the simple exponential distribution and then its extension, the Weibull distribution. Simulation studies are used to investigate the properties of the resulting isotonic functions. We apply this methodology to the Diabetes Control and Complication Trial (DCCT) data set to identify potential change points in the association between HbA1c and the risk of severe hypoglycemia. Public Library of Science 2014-12-04 /pmc/articles/PMC4256386/ /pubmed/25473827 http://dx.doi.org/10.1371/journal.pone.0113948 Text en © 2014 Ma et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Ma, Yong
Lai, Yinglei
Lachin, John M.
Identifying Change Points in a Covariate Effect on Time-to-Event Analysis with Reduced Isotonic Regression
title Identifying Change Points in a Covariate Effect on Time-to-Event Analysis with Reduced Isotonic Regression
title_full Identifying Change Points in a Covariate Effect on Time-to-Event Analysis with Reduced Isotonic Regression
title_fullStr Identifying Change Points in a Covariate Effect on Time-to-Event Analysis with Reduced Isotonic Regression
title_full_unstemmed Identifying Change Points in a Covariate Effect on Time-to-Event Analysis with Reduced Isotonic Regression
title_short Identifying Change Points in a Covariate Effect on Time-to-Event Analysis with Reduced Isotonic Regression
title_sort identifying change points in a covariate effect on time-to-event analysis with reduced isotonic regression
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4256386/
https://www.ncbi.nlm.nih.gov/pubmed/25473827
http://dx.doi.org/10.1371/journal.pone.0113948
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