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Dynalign II: common secondary structure prediction for RNA homologs with domain insertions

Homologous non-coding RNAs frequently exhibit domain insertions, where a branch of secondary structure is inserted in a sequence with respect to its homologs. Dynamic programming algorithms for common secondary structure prediction of multiple RNA homologs, however, do not account for these domain i...

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Detalles Bibliográficos
Autores principales: Fu, Yinghan, Sharma, Gaurav, Mathews, David H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
RNA
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4267632/
https://www.ncbi.nlm.nih.gov/pubmed/25416799
http://dx.doi.org/10.1093/nar/gku1172