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CLAST: CUDA implemented large-scale alignment search tool

BACKGROUND: Metagenomics is a powerful methodology to study microbial communities, but it is highly dependent on nucleotide sequence similarity searching against sequence databases. Metagenomic analyses with next-generation sequencing technologies produce enormous numbers of reads from microbial com...

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Detalles Bibliográficos
Autores principales: Yano, Masahiro, Mori, Hiroshi, Akiyama, Yutaka, Yamada, Takuji, Kurokawa, Ken
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4271471/
https://www.ncbi.nlm.nih.gov/pubmed/25495907
http://dx.doi.org/10.1186/s12859-014-0406-y