Cargando…
Causal signals between codon bias, mRNA structure, and the efficiency of translation and elongation
Ribosome profiling data report on the distribution of translating ribosomes, at steady-state, with codon-level resolution. We present a robust method to extract codon translation rates and protein synthesis rates from these data, and identify causal features associated with elongation and translatio...
Autores principales: | Pop, Cristina, Rouskin, Silvi, Ingolia, Nicholas T, Han, Lu, Phizicky, Eric M, Weissman, Jonathan S, Koller, Daphne |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BlackWell Publishing Ltd
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4300493/ https://www.ncbi.nlm.nih.gov/pubmed/25538139 http://dx.doi.org/10.15252/msb.20145524 |
Ejemplares similares
-
Operon mRNAs are organized into ORF-centric structures that predict translation efficiency
por: Burkhardt, David H, et al.
Publicado: (2017) -
Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo
por: Rouskin, Silvi, et al.
Publicado: (2013) -
Differential translation of mRNA isoforms transcribed with distinct sigma factors
por: McCormick, Dylan M., et al.
Publicado: (2021) -
Codon stabilization coefficient as a metric to gain insights into mRNA stability and codon bias and their relationships with translation
por: Carneiro, Rodolfo L, et al.
Publicado: (2019) -
Recognition of 3′ nucleotide context and stop codon readthrough are determined during mRNA translation elongation
por: Biziaev, Nikita, et al.
Publicado: (2022)