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Impacts of low coverage depths and post-mortem DNA damage on variant calling: a simulation study

BACKGROUND: Massively parallel sequencing platforms, featuring high throughput and relatively short read lengths, are well suited to ancient DNA (aDNA) studies. Variant identification from short-read alignment could be hindered, however, by low DNA concentrations common to historic samples, which co...

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Detalles Bibliográficos
Autores principales: Parks, Matthew, Lambert, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4312461/
https://www.ncbi.nlm.nih.gov/pubmed/25613391
http://dx.doi.org/10.1186/s12864-015-1219-8