Cargando…

Identification of a Histidine Metal Ligand in the argE-Encoded N-Acetyl-L-Ornithine Deacetylase from Escherichia coli

The H355A, H355K, H80A, and H80K mutant enzymes of the argE-encoded N-acetyl-L-ornithine deacetylase (ArgE) from Escherichia coli were prepared, however, only the H355A enzyme was found to be soluble. Kinetic analysis of the Co(II)-loaded H355A exhibited activity levels that were 380-fold less than...

Descripción completa

Detalles Bibliográficos
Autores principales: McGregor, Wade C, Gillner, Danuta M, Swierczek, Sabina I, Liu, Dali, Holz, Richard C
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4320195/
https://www.ncbi.nlm.nih.gov/pubmed/25674394
http://dx.doi.org/10.1186/2193-1801-2-482
_version_ 1782356081443340288
author McGregor, Wade C
Gillner, Danuta M
Swierczek, Sabina I
Liu, Dali
Holz, Richard C
author_facet McGregor, Wade C
Gillner, Danuta M
Swierczek, Sabina I
Liu, Dali
Holz, Richard C
author_sort McGregor, Wade C
collection PubMed
description The H355A, H355K, H80A, and H80K mutant enzymes of the argE-encoded N-acetyl-L-ornithine deacetylase (ArgE) from Escherichia coli were prepared, however, only the H355A enzyme was found to be soluble. Kinetic analysis of the Co(II)-loaded H355A exhibited activity levels that were 380-fold less than Co(II)-loaded WT ArgE. Electronic absorption spectra of Co(II)-loaded H355A-ArgE indicate that the bound Co(II) ion resides in a distorted, five-coordinate environment and Isothermal Titration Calorimetry (ITC) data for Zn(II) binding to the H355A enzyme provided a dissociation constant (K(d)) of 39 μM. A three-dimensional homology model of ArgE was generated using the X-ray crystal structure of the dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE) from Haemophilus influenzae confirming the assignment of H355 as well as H80 as active site ligands.
format Online
Article
Text
id pubmed-4320195
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Springer International Publishing
record_format MEDLINE/PubMed
spelling pubmed-43201952015-02-11 Identification of a Histidine Metal Ligand in the argE-Encoded N-Acetyl-L-Ornithine Deacetylase from Escherichia coli McGregor, Wade C Gillner, Danuta M Swierczek, Sabina I Liu, Dali Holz, Richard C Springerplus Research The H355A, H355K, H80A, and H80K mutant enzymes of the argE-encoded N-acetyl-L-ornithine deacetylase (ArgE) from Escherichia coli were prepared, however, only the H355A enzyme was found to be soluble. Kinetic analysis of the Co(II)-loaded H355A exhibited activity levels that were 380-fold less than Co(II)-loaded WT ArgE. Electronic absorption spectra of Co(II)-loaded H355A-ArgE indicate that the bound Co(II) ion resides in a distorted, five-coordinate environment and Isothermal Titration Calorimetry (ITC) data for Zn(II) binding to the H355A enzyme provided a dissociation constant (K(d)) of 39 μM. A three-dimensional homology model of ArgE was generated using the X-ray crystal structure of the dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE) from Haemophilus influenzae confirming the assignment of H355 as well as H80 as active site ligands. Springer International Publishing 2013-09-23 /pmc/articles/PMC4320195/ /pubmed/25674394 http://dx.doi.org/10.1186/2193-1801-2-482 Text en © McGregor et al.; licensee Springer. 2013 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
McGregor, Wade C
Gillner, Danuta M
Swierczek, Sabina I
Liu, Dali
Holz, Richard C
Identification of a Histidine Metal Ligand in the argE-Encoded N-Acetyl-L-Ornithine Deacetylase from Escherichia coli
title Identification of a Histidine Metal Ligand in the argE-Encoded N-Acetyl-L-Ornithine Deacetylase from Escherichia coli
title_full Identification of a Histidine Metal Ligand in the argE-Encoded N-Acetyl-L-Ornithine Deacetylase from Escherichia coli
title_fullStr Identification of a Histidine Metal Ligand in the argE-Encoded N-Acetyl-L-Ornithine Deacetylase from Escherichia coli
title_full_unstemmed Identification of a Histidine Metal Ligand in the argE-Encoded N-Acetyl-L-Ornithine Deacetylase from Escherichia coli
title_short Identification of a Histidine Metal Ligand in the argE-Encoded N-Acetyl-L-Ornithine Deacetylase from Escherichia coli
title_sort identification of a histidine metal ligand in the arge-encoded n-acetyl-l-ornithine deacetylase from escherichia coli
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4320195/
https://www.ncbi.nlm.nih.gov/pubmed/25674394
http://dx.doi.org/10.1186/2193-1801-2-482
work_keys_str_mv AT mcgregorwadec identificationofahistidinemetalligandintheargeencodednacetyllornithinedeacetylasefromescherichiacoli
AT gillnerdanutam identificationofahistidinemetalligandintheargeencodednacetyllornithinedeacetylasefromescherichiacoli
AT swierczeksabinai identificationofahistidinemetalligandintheargeencodednacetyllornithinedeacetylasefromescherichiacoli
AT liudali identificationofahistidinemetalligandintheargeencodednacetyllornithinedeacetylasefromescherichiacoli
AT holzrichardc identificationofahistidinemetalligandintheargeencodednacetyllornithinedeacetylasefromescherichiacoli