piPipes: a set of pipelines for piRNA and transposon analysis via small RNA-seq, RNA-seq, degradome- and CAGE-seq, ChIP-seq and genomic DNA sequencing

Motivation: PIWI-interacting RNAs (piRNAs), 23–36 nt small silencing RNAs, repress transposon expression in the metazoan germ line, thereby protecting the genome. Although high-throughput sequencing has made it possible to examine the genome and transcriptome at unprecedented resolution, extracting...

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Detalles Bibliográficos
Autores principales: Han, Bo W., Wang, Wei, Zamore, Phillip D., Weng, Zhiping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4325541/
https://www.ncbi.nlm.nih.gov/pubmed/25342065
http://dx.doi.org/10.1093/bioinformatics/btu647

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4325541/
https://www.ncbi.nlm.nih.gov/pubmed/25342065
http://dx.doi.org/10.1093/bioinformatics/btu647

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