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Acceleration of discrete stochastic biochemical simulation using GPGPU

For systems made up of a small number of molecules, such as a biochemical network in a single cell, a simulation requires a stochastic approach, instead of a deterministic approach. The stochastic simulation algorithm (SSA) simulates the stochastic behavior of a spatially homogeneous system. Since s...

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Detalles Bibliográficos
Autores principales: Sumiyoshi, Kei, Hirata, Kazuki, Hiroi, Noriko, Funahashi, Akira
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4327578/
https://www.ncbi.nlm.nih.gov/pubmed/25762936
http://dx.doi.org/10.3389/fphys.2015.00042