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NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation

The transcription factor NFATc2 regulates dendritic cell (DC) responses to microbial stimulation through the C-type lectin receptor dectin-1. But the genetic targets of NFATc2 and their effects on DC function remain largely unknown. Therefore we used ChIP-seq to conduct genome-wide mapping of NFATc2...

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Autores principales: Yu, Hong-Bing, Yurieva, Marina, Balachander, Akhila, Foo, Ivy, Leong, Xiangrong, Zelante, Teresa, Zolezzi, Francesca, Poidinger, Michael, Ricciardi-Castagnoli, Paola
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333412/
https://www.ncbi.nlm.nih.gov/pubmed/25550437
http://dx.doi.org/10.1093/nar/gku1369
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author Yu, Hong-Bing
Yurieva, Marina
Balachander, Akhila
Foo, Ivy
Leong, Xiangrong
Zelante, Teresa
Zolezzi, Francesca
Poidinger, Michael
Ricciardi-Castagnoli, Paola
author_facet Yu, Hong-Bing
Yurieva, Marina
Balachander, Akhila
Foo, Ivy
Leong, Xiangrong
Zelante, Teresa
Zolezzi, Francesca
Poidinger, Michael
Ricciardi-Castagnoli, Paola
author_sort Yu, Hong-Bing
collection PubMed
description The transcription factor NFATc2 regulates dendritic cell (DC) responses to microbial stimulation through the C-type lectin receptor dectin-1. But the genetic targets of NFATc2 and their effects on DC function remain largely unknown. Therefore we used ChIP-seq to conduct genome-wide mapping of NFATc2 target sites in dectin-1-activated DCs. By combining binding-site data with a comprehensive gene expression profile, we found that NFATc2 occupancy regulates the expression of a subset of dectin-1-activated genes. Surprisingly, NFATc2 targeted an extensive range of DC-derived cytokines and chemokines, including regulatory cytokines such as IL2, IL23a and IL12b. Furthermore, we demonstrated that NFATc2 binding is required to induce the histone 3 lysine 4 trimethylation (H3K4me3) epigenetic mark, which is associated with enhanced gene expression. Together, these data show that the transcription factor NFATc2 mediates epigenetic modification of DC cytokine and chemokine genes leading to activation of their expression.
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spelling pubmed-43334122015-02-26 NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation Yu, Hong-Bing Yurieva, Marina Balachander, Akhila Foo, Ivy Leong, Xiangrong Zelante, Teresa Zolezzi, Francesca Poidinger, Michael Ricciardi-Castagnoli, Paola Nucleic Acids Res Gene regulation, Chromatin and Epigenetics The transcription factor NFATc2 regulates dendritic cell (DC) responses to microbial stimulation through the C-type lectin receptor dectin-1. But the genetic targets of NFATc2 and their effects on DC function remain largely unknown. Therefore we used ChIP-seq to conduct genome-wide mapping of NFATc2 target sites in dectin-1-activated DCs. By combining binding-site data with a comprehensive gene expression profile, we found that NFATc2 occupancy regulates the expression of a subset of dectin-1-activated genes. Surprisingly, NFATc2 targeted an extensive range of DC-derived cytokines and chemokines, including regulatory cytokines such as IL2, IL23a and IL12b. Furthermore, we demonstrated that NFATc2 binding is required to induce the histone 3 lysine 4 trimethylation (H3K4me3) epigenetic mark, which is associated with enhanced gene expression. Together, these data show that the transcription factor NFATc2 mediates epigenetic modification of DC cytokine and chemokine genes leading to activation of their expression. Oxford University Press 2015-01-30 2014-12-30 /pmc/articles/PMC4333412/ /pubmed/25550437 http://dx.doi.org/10.1093/nar/gku1369 Text en © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Gene regulation, Chromatin and Epigenetics
Yu, Hong-Bing
Yurieva, Marina
Balachander, Akhila
Foo, Ivy
Leong, Xiangrong
Zelante, Teresa
Zolezzi, Francesca
Poidinger, Michael
Ricciardi-Castagnoli, Paola
NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation
title NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation
title_full NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation
title_fullStr NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation
title_full_unstemmed NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation
title_short NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation
title_sort nfatc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation
topic Gene regulation, Chromatin and Epigenetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333412/
https://www.ncbi.nlm.nih.gov/pubmed/25550437
http://dx.doi.org/10.1093/nar/gku1369
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