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NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation
The transcription factor NFATc2 regulates dendritic cell (DC) responses to microbial stimulation through the C-type lectin receptor dectin-1. But the genetic targets of NFATc2 and their effects on DC function remain largely unknown. Therefore we used ChIP-seq to conduct genome-wide mapping of NFATc2...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333412/ https://www.ncbi.nlm.nih.gov/pubmed/25550437 http://dx.doi.org/10.1093/nar/gku1369 |
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author | Yu, Hong-Bing Yurieva, Marina Balachander, Akhila Foo, Ivy Leong, Xiangrong Zelante, Teresa Zolezzi, Francesca Poidinger, Michael Ricciardi-Castagnoli, Paola |
author_facet | Yu, Hong-Bing Yurieva, Marina Balachander, Akhila Foo, Ivy Leong, Xiangrong Zelante, Teresa Zolezzi, Francesca Poidinger, Michael Ricciardi-Castagnoli, Paola |
author_sort | Yu, Hong-Bing |
collection | PubMed |
description | The transcription factor NFATc2 regulates dendritic cell (DC) responses to microbial stimulation through the C-type lectin receptor dectin-1. But the genetic targets of NFATc2 and their effects on DC function remain largely unknown. Therefore we used ChIP-seq to conduct genome-wide mapping of NFATc2 target sites in dectin-1-activated DCs. By combining binding-site data with a comprehensive gene expression profile, we found that NFATc2 occupancy regulates the expression of a subset of dectin-1-activated genes. Surprisingly, NFATc2 targeted an extensive range of DC-derived cytokines and chemokines, including regulatory cytokines such as IL2, IL23a and IL12b. Furthermore, we demonstrated that NFATc2 binding is required to induce the histone 3 lysine 4 trimethylation (H3K4me3) epigenetic mark, which is associated with enhanced gene expression. Together, these data show that the transcription factor NFATc2 mediates epigenetic modification of DC cytokine and chemokine genes leading to activation of their expression. |
format | Online Article Text |
id | pubmed-4333412 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-43334122015-02-26 NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation Yu, Hong-Bing Yurieva, Marina Balachander, Akhila Foo, Ivy Leong, Xiangrong Zelante, Teresa Zolezzi, Francesca Poidinger, Michael Ricciardi-Castagnoli, Paola Nucleic Acids Res Gene regulation, Chromatin and Epigenetics The transcription factor NFATc2 regulates dendritic cell (DC) responses to microbial stimulation through the C-type lectin receptor dectin-1. But the genetic targets of NFATc2 and their effects on DC function remain largely unknown. Therefore we used ChIP-seq to conduct genome-wide mapping of NFATc2 target sites in dectin-1-activated DCs. By combining binding-site data with a comprehensive gene expression profile, we found that NFATc2 occupancy regulates the expression of a subset of dectin-1-activated genes. Surprisingly, NFATc2 targeted an extensive range of DC-derived cytokines and chemokines, including regulatory cytokines such as IL2, IL23a and IL12b. Furthermore, we demonstrated that NFATc2 binding is required to induce the histone 3 lysine 4 trimethylation (H3K4me3) epigenetic mark, which is associated with enhanced gene expression. Together, these data show that the transcription factor NFATc2 mediates epigenetic modification of DC cytokine and chemokine genes leading to activation of their expression. Oxford University Press 2015-01-30 2014-12-30 /pmc/articles/PMC4333412/ /pubmed/25550437 http://dx.doi.org/10.1093/nar/gku1369 Text en © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Gene regulation, Chromatin and Epigenetics Yu, Hong-Bing Yurieva, Marina Balachander, Akhila Foo, Ivy Leong, Xiangrong Zelante, Teresa Zolezzi, Francesca Poidinger, Michael Ricciardi-Castagnoli, Paola NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation |
title | NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation |
title_full | NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation |
title_fullStr | NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation |
title_full_unstemmed | NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation |
title_short | NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation |
title_sort | nfatc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation |
topic | Gene regulation, Chromatin and Epigenetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333412/ https://www.ncbi.nlm.nih.gov/pubmed/25550437 http://dx.doi.org/10.1093/nar/gku1369 |
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