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Non-canonical 3′-5′ Extension of RNA with Prebiotically Plausible Ribonucleoside 2′,3′-Cyclic Phosphates
[Image: see text] Ribonucleoside 2′,3′-cyclic phosphates (N>p’s) are generated by multiple prebiotically plausible processes and are credible building blocks for the assembly of early RNA oligomers. While N>p’s can be polymerized into short RNAs by non-enzymatic processes with variable efficie...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333585/ https://www.ncbi.nlm.nih.gov/pubmed/24660752 http://dx.doi.org/10.1021/ja4127714 |
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author | Mutschler, Hannes Holliger, Philipp |
author_facet | Mutschler, Hannes Holliger, Philipp |
author_sort | Mutschler, Hannes |
collection | PubMed |
description | [Image: see text] Ribonucleoside 2′,3′-cyclic phosphates (N>p’s) are generated by multiple prebiotically plausible processes and are credible building blocks for the assembly of early RNA oligomers. While N>p’s can be polymerized into short RNAs by non-enzymatic processes with variable efficiency and regioselectivity, no enzymatic route for RNA synthesis had been described. Here we report such a non-canonical 3′-5′ nucleotidyl transferase activity. We engineered a variant of the hairpin ribozyme to catalyze addition of all four N>p’s (2′,3′-cyclic A-, G-, U-, and CMP) to the 5′-hydroxyl termini of RNA strands with 5′ nucleotide addition enhanced in all cases by eutectic ice phase formation at −7 °C. We also observed 5′ addition of 2′,3′-cyclic phosphate-activated β-nicotinamide adenine dinucleotide (NAD>p) and ACA>p RNA trinucleotide, and multiple additions of GUCCA>p RNA pentamers. Our results establish a new mode of RNA 3′-5′ extension with implications for RNA oligomer synthesis from prebiotic nucleotide pools. |
format | Online Article Text |
id | pubmed-4333585 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-43335852015-02-19 Non-canonical 3′-5′ Extension of RNA with Prebiotically Plausible Ribonucleoside 2′,3′-Cyclic Phosphates Mutschler, Hannes Holliger, Philipp J Am Chem Soc [Image: see text] Ribonucleoside 2′,3′-cyclic phosphates (N>p’s) are generated by multiple prebiotically plausible processes and are credible building blocks for the assembly of early RNA oligomers. While N>p’s can be polymerized into short RNAs by non-enzymatic processes with variable efficiency and regioselectivity, no enzymatic route for RNA synthesis had been described. Here we report such a non-canonical 3′-5′ nucleotidyl transferase activity. We engineered a variant of the hairpin ribozyme to catalyze addition of all four N>p’s (2′,3′-cyclic A-, G-, U-, and CMP) to the 5′-hydroxyl termini of RNA strands with 5′ nucleotide addition enhanced in all cases by eutectic ice phase formation at −7 °C. We also observed 5′ addition of 2′,3′-cyclic phosphate-activated β-nicotinamide adenine dinucleotide (NAD>p) and ACA>p RNA trinucleotide, and multiple additions of GUCCA>p RNA pentamers. Our results establish a new mode of RNA 3′-5′ extension with implications for RNA oligomer synthesis from prebiotic nucleotide pools. American Chemical Society 2014-03-24 2014-04-09 /pmc/articles/PMC4333585/ /pubmed/24660752 http://dx.doi.org/10.1021/ja4127714 Text en Copyright © 2014 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. |
spellingShingle | Mutschler, Hannes Holliger, Philipp Non-canonical 3′-5′ Extension of RNA with Prebiotically Plausible Ribonucleoside 2′,3′-Cyclic Phosphates |
title | Non-canonical
3′-5′ Extension of RNA
with Prebiotically Plausible Ribonucleoside 2′,3′-Cyclic
Phosphates |
title_full | Non-canonical
3′-5′ Extension of RNA
with Prebiotically Plausible Ribonucleoside 2′,3′-Cyclic
Phosphates |
title_fullStr | Non-canonical
3′-5′ Extension of RNA
with Prebiotically Plausible Ribonucleoside 2′,3′-Cyclic
Phosphates |
title_full_unstemmed | Non-canonical
3′-5′ Extension of RNA
with Prebiotically Plausible Ribonucleoside 2′,3′-Cyclic
Phosphates |
title_short | Non-canonical
3′-5′ Extension of RNA
with Prebiotically Plausible Ribonucleoside 2′,3′-Cyclic
Phosphates |
title_sort | non-canonical
3′-5′ extension of rna
with prebiotically plausible ribonucleoside 2′,3′-cyclic
phosphates |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333585/ https://www.ncbi.nlm.nih.gov/pubmed/24660752 http://dx.doi.org/10.1021/ja4127714 |
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