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Mutagenic effects induced by the attack of NO(2) radical to the guanine-cytosine base pair

We investigate the attack of the nitrogen dioxide radical (NO(•)(2)) to the guanine—cytosine (GC) base pair and the subsequent tautomeric reactions able to induce mutations, by means of density functional theory (DFT) calculations. The conducted simulations allow us to identify the most reactive sit...

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Autores principales: Cerón-Carrasco, José P., Requena, Alberto, Zúñiga, José, Jacquemin, Denis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4351615/
https://www.ncbi.nlm.nih.gov/pubmed/25798437
http://dx.doi.org/10.3389/fchem.2015.00013
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author Cerón-Carrasco, José P.
Requena, Alberto
Zúñiga, José
Jacquemin, Denis
author_facet Cerón-Carrasco, José P.
Requena, Alberto
Zúñiga, José
Jacquemin, Denis
author_sort Cerón-Carrasco, José P.
collection PubMed
description We investigate the attack of the nitrogen dioxide radical (NO(•)(2)) to the guanine—cytosine (GC) base pair and the subsequent tautomeric reactions able to induce mutations, by means of density functional theory (DFT) calculations. The conducted simulations allow us to identify the most reactive sites of the GC base pair. Indeed, the computed relative energies demonstrate that the addition of the NO(•)(2) radical to the C8 position of the guanine base forms to the most stable adduct. Although the initial adducts might evolve to non-canonical structures via inter-base hydrogen bonds rearrangements, the probability for the proton exchange to occur lies in the same range as that observed for undamaged DNA. As a result, tautomeric errors in NO(2)-attacked DNA arises at the same rate as in canonical DNA, with no macroscopic impact on the overall stability of DNA. The potential mutagenic effects of the GC–NO(•)(2) radical adducts likely involve side reactions, e.g., the GC deprotonation to the solvent, rather than proton exchange between guanine and cytosine basis.
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spelling pubmed-43516152015-03-20 Mutagenic effects induced by the attack of NO(2) radical to the guanine-cytosine base pair Cerón-Carrasco, José P. Requena, Alberto Zúñiga, José Jacquemin, Denis Front Chem Chemistry We investigate the attack of the nitrogen dioxide radical (NO(•)(2)) to the guanine—cytosine (GC) base pair and the subsequent tautomeric reactions able to induce mutations, by means of density functional theory (DFT) calculations. The conducted simulations allow us to identify the most reactive sites of the GC base pair. Indeed, the computed relative energies demonstrate that the addition of the NO(•)(2) radical to the C8 position of the guanine base forms to the most stable adduct. Although the initial adducts might evolve to non-canonical structures via inter-base hydrogen bonds rearrangements, the probability for the proton exchange to occur lies in the same range as that observed for undamaged DNA. As a result, tautomeric errors in NO(2)-attacked DNA arises at the same rate as in canonical DNA, with no macroscopic impact on the overall stability of DNA. The potential mutagenic effects of the GC–NO(•)(2) radical adducts likely involve side reactions, e.g., the GC deprotonation to the solvent, rather than proton exchange between guanine and cytosine basis. Frontiers Media S.A. 2015-03-06 /pmc/articles/PMC4351615/ /pubmed/25798437 http://dx.doi.org/10.3389/fchem.2015.00013 Text en Copyright © 2015 Cerón-Carrasco, Requena, Zúñiga and Jacquemin. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Chemistry
Cerón-Carrasco, José P.
Requena, Alberto
Zúñiga, José
Jacquemin, Denis
Mutagenic effects induced by the attack of NO(2) radical to the guanine-cytosine base pair
title Mutagenic effects induced by the attack of NO(2) radical to the guanine-cytosine base pair
title_full Mutagenic effects induced by the attack of NO(2) radical to the guanine-cytosine base pair
title_fullStr Mutagenic effects induced by the attack of NO(2) radical to the guanine-cytosine base pair
title_full_unstemmed Mutagenic effects induced by the attack of NO(2) radical to the guanine-cytosine base pair
title_short Mutagenic effects induced by the attack of NO(2) radical to the guanine-cytosine base pair
title_sort mutagenic effects induced by the attack of no(2) radical to the guanine-cytosine base pair
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4351615/
https://www.ncbi.nlm.nih.gov/pubmed/25798437
http://dx.doi.org/10.3389/fchem.2015.00013
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