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A fast algorithm for determining the best combination of local alignments to a query sequence

BACKGROUND: Existing sequence alignment algorithms assume that similarities between DNA or amino acid sequences are linearly ordered. That is, stretches of similar nucleotides or amino acids are in the same order in both sequences. Recombination perturbs this order. An algorithm that can reconstruct...

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Detalles Bibliográficos
Autores principales: Conant, Gavin C, Wagner, Andreas
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2004
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC436051/
https://www.ncbi.nlm.nih.gov/pubmed/15149555
http://dx.doi.org/10.1186/1471-2105-5-62