Fast inexact mapping using advanced tree exploration on backward search methods

BACKGROUND: Short sequence mapping methods for Next Generation Sequencing consist on a combination of seeding techniques followed by local alignment based on dynamic programming approaches. Most seeding algorithms are based on backward search alignment, using the Burrows Wheeler Transform, the Ferra...

Descripción completa

Detalles Bibliográficos
Autores principales: Salavert, José, Tomás, Andrés, Tárraga, Joaquín, Medina, Ignacio, Dopazo, Joaquín, Blanquer, Ignacio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4384339/
https://www.ncbi.nlm.nih.gov/pubmed/25626517
http://dx.doi.org/10.1186/s12859-014-0438-3

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4384339/
https://www.ncbi.nlm.nih.gov/pubmed/25626517
http://dx.doi.org/10.1186/s12859-014-0438-3

Ejemplares similares