Cargando…

New Point Mutations in Surface and Core Genes of Hepatitis B Virus Associated with Acute on Chronic Liver Failure Identified by Complete Genomic Sequencing

The objective of this study was to identify new viral biomarkers associated with acute on chronic liver failure (ACLF) by complete genomic sequencing of HBV. Hepatitis B virus mutations associated with ACLF were screened by Illumina high-throughput sequencing in twelve ACLF cases and twelve age-matc...

Descripción completa

Detalles Bibliográficos
Autores principales: Xu, Hangdi, Zhao, Mingfei, Lou, Guohua, Zheng, Min, Cao, Qingyi, Chen, Zhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4388673/
https://www.ncbi.nlm.nih.gov/pubmed/25849554
http://dx.doi.org/10.1371/journal.pone.0123139
_version_ 1782365422944780288
author Xu, Hangdi
Zhao, Mingfei
Lou, Guohua
Zheng, Min
Cao, Qingyi
Chen, Zhi
author_facet Xu, Hangdi
Zhao, Mingfei
Lou, Guohua
Zheng, Min
Cao, Qingyi
Chen, Zhi
author_sort Xu, Hangdi
collection PubMed
description The objective of this study was to identify new viral biomarkers associated with acute on chronic liver failure (ACLF) by complete genomic sequencing of HBV. Hepatitis B virus mutations associated with ACLF were screened by Illumina high-throughput sequencing in twelve ACLF cases and twelve age-matched mild chronic hepatitis B patients, which were validated in 438 chronic hepatitis B patients (80 asymptomatic carriers, 152 mild chronic hepatitis B patients, 102 severe chronic hepatitis B patients and 104 ACLF patients) by direct sequencing. The results of Illumina sequencing showed that the mutations at 7 sites (T216C, G285A, A1846T, G1896A, C1913A/G, A2159G, and A2189C) of 12 ACLF patients were significantly higher than those of 12 controls. In the validation cohorts, a significantly higher ratio of genotype B to C was found in patients with ACLF than in patients with non-ACLF. Multivariate analysis showed that T216C, G1896A, C1913A/G and A2159G/C were independent risk factors for ACLF. C216 in any combination, A/G1913 in any combination, and G/C2159 in any combination had high specificity for ACLF. In summary, T216C and A2159G/C mutations were novel factors independently associated with ACLF. Combined mutations in hepatitis B cases could play important roles in ACLF development.
format Online
Article
Text
id pubmed-4388673
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-43886732015-04-21 New Point Mutations in Surface and Core Genes of Hepatitis B Virus Associated with Acute on Chronic Liver Failure Identified by Complete Genomic Sequencing Xu, Hangdi Zhao, Mingfei Lou, Guohua Zheng, Min Cao, Qingyi Chen, Zhi PLoS One Research Article The objective of this study was to identify new viral biomarkers associated with acute on chronic liver failure (ACLF) by complete genomic sequencing of HBV. Hepatitis B virus mutations associated with ACLF were screened by Illumina high-throughput sequencing in twelve ACLF cases and twelve age-matched mild chronic hepatitis B patients, which were validated in 438 chronic hepatitis B patients (80 asymptomatic carriers, 152 mild chronic hepatitis B patients, 102 severe chronic hepatitis B patients and 104 ACLF patients) by direct sequencing. The results of Illumina sequencing showed that the mutations at 7 sites (T216C, G285A, A1846T, G1896A, C1913A/G, A2159G, and A2189C) of 12 ACLF patients were significantly higher than those of 12 controls. In the validation cohorts, a significantly higher ratio of genotype B to C was found in patients with ACLF than in patients with non-ACLF. Multivariate analysis showed that T216C, G1896A, C1913A/G and A2159G/C were independent risk factors for ACLF. C216 in any combination, A/G1913 in any combination, and G/C2159 in any combination had high specificity for ACLF. In summary, T216C and A2159G/C mutations were novel factors independently associated with ACLF. Combined mutations in hepatitis B cases could play important roles in ACLF development. Public Library of Science 2015-04-07 /pmc/articles/PMC4388673/ /pubmed/25849554 http://dx.doi.org/10.1371/journal.pone.0123139 Text en © 2015 Xu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Xu, Hangdi
Zhao, Mingfei
Lou, Guohua
Zheng, Min
Cao, Qingyi
Chen, Zhi
New Point Mutations in Surface and Core Genes of Hepatitis B Virus Associated with Acute on Chronic Liver Failure Identified by Complete Genomic Sequencing
title New Point Mutations in Surface and Core Genes of Hepatitis B Virus Associated with Acute on Chronic Liver Failure Identified by Complete Genomic Sequencing
title_full New Point Mutations in Surface and Core Genes of Hepatitis B Virus Associated with Acute on Chronic Liver Failure Identified by Complete Genomic Sequencing
title_fullStr New Point Mutations in Surface and Core Genes of Hepatitis B Virus Associated with Acute on Chronic Liver Failure Identified by Complete Genomic Sequencing
title_full_unstemmed New Point Mutations in Surface and Core Genes of Hepatitis B Virus Associated with Acute on Chronic Liver Failure Identified by Complete Genomic Sequencing
title_short New Point Mutations in Surface and Core Genes of Hepatitis B Virus Associated with Acute on Chronic Liver Failure Identified by Complete Genomic Sequencing
title_sort new point mutations in surface and core genes of hepatitis b virus associated with acute on chronic liver failure identified by complete genomic sequencing
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4388673/
https://www.ncbi.nlm.nih.gov/pubmed/25849554
http://dx.doi.org/10.1371/journal.pone.0123139
work_keys_str_mv AT xuhangdi newpointmutationsinsurfaceandcoregenesofhepatitisbvirusassociatedwithacuteonchronicliverfailureidentifiedbycompletegenomicsequencing
AT zhaomingfei newpointmutationsinsurfaceandcoregenesofhepatitisbvirusassociatedwithacuteonchronicliverfailureidentifiedbycompletegenomicsequencing
AT louguohua newpointmutationsinsurfaceandcoregenesofhepatitisbvirusassociatedwithacuteonchronicliverfailureidentifiedbycompletegenomicsequencing
AT zhengmin newpointmutationsinsurfaceandcoregenesofhepatitisbvirusassociatedwithacuteonchronicliverfailureidentifiedbycompletegenomicsequencing
AT caoqingyi newpointmutationsinsurfaceandcoregenesofhepatitisbvirusassociatedwithacuteonchronicliverfailureidentifiedbycompletegenomicsequencing
AT chenzhi newpointmutationsinsurfaceandcoregenesofhepatitisbvirusassociatedwithacuteonchronicliverfailureidentifiedbycompletegenomicsequencing