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Sources of dynamic variability in NF-κB signal transduction: A mechanistic model
The transcription factor NF-κB (p65/p50) plays a central role in the coordination of cellular responses by activating the transcription of numerous target genes. The precise role of the dynamics of NF-κB signalling in regulating gene expression is still an open question. Here, we show that besides e...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Blackwell Publishing Ltd
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4409097/ https://www.ncbi.nlm.nih.gov/pubmed/25640005 http://dx.doi.org/10.1002/bies.201400113 |
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author | Mothes, Janina Busse, Dorothea Kofahl, Bente Wolf, Jana |
author_facet | Mothes, Janina Busse, Dorothea Kofahl, Bente Wolf, Jana |
author_sort | Mothes, Janina |
collection | PubMed |
description | The transcription factor NF-κB (p65/p50) plays a central role in the coordination of cellular responses by activating the transcription of numerous target genes. The precise role of the dynamics of NF-κB signalling in regulating gene expression is still an open question. Here, we show that besides external stimulation intracellular parameters can influence the dynamics of NF-κB. By applying mathematical modelling and bifurcation analyses, we show that NF-κB is capable of exhibiting different types of dynamics in response to the same stimulus. We identified the total NF-κB concentration and the IκBα transcription rate constant as two critical parameters that modulate the dynamics and the fold change of NF-κB. Both parameters might vary as a result of cell-to-cell variability. The regulation of the IκBα transcription rate constant, e.g. by co-factors, provides the possibility of regulating the NF-κB dynamics by crosstalk. |
format | Online Article Text |
id | pubmed-4409097 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Blackwell Publishing Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-44090972015-04-29 Sources of dynamic variability in NF-κB signal transduction: A mechanistic model Mothes, Janina Busse, Dorothea Kofahl, Bente Wolf, Jana Bioessays Prospects & Overviews The transcription factor NF-κB (p65/p50) plays a central role in the coordination of cellular responses by activating the transcription of numerous target genes. The precise role of the dynamics of NF-κB signalling in regulating gene expression is still an open question. Here, we show that besides external stimulation intracellular parameters can influence the dynamics of NF-κB. By applying mathematical modelling and bifurcation analyses, we show that NF-κB is capable of exhibiting different types of dynamics in response to the same stimulus. We identified the total NF-κB concentration and the IκBα transcription rate constant as two critical parameters that modulate the dynamics and the fold change of NF-κB. Both parameters might vary as a result of cell-to-cell variability. The regulation of the IκBα transcription rate constant, e.g. by co-factors, provides the possibility of regulating the NF-κB dynamics by crosstalk. Blackwell Publishing Ltd 2015-04 2015-01-30 /pmc/articles/PMC4409097/ /pubmed/25640005 http://dx.doi.org/10.1002/bies.201400113 Text en © 2015 The Authors. Bioessays published by WILEY Periodicals, Inc. http://creativecommons.org/licenses/by-nc/4.0/ This is an open access article under the terms of the Creative Commons Attribution-NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Prospects & Overviews Mothes, Janina Busse, Dorothea Kofahl, Bente Wolf, Jana Sources of dynamic variability in NF-κB signal transduction: A mechanistic model |
title | Sources of dynamic variability in NF-κB signal transduction: A mechanistic model |
title_full | Sources of dynamic variability in NF-κB signal transduction: A mechanistic model |
title_fullStr | Sources of dynamic variability in NF-κB signal transduction: A mechanistic model |
title_full_unstemmed | Sources of dynamic variability in NF-κB signal transduction: A mechanistic model |
title_short | Sources of dynamic variability in NF-κB signal transduction: A mechanistic model |
title_sort | sources of dynamic variability in nf-κb signal transduction: a mechanistic model |
topic | Prospects & Overviews |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4409097/ https://www.ncbi.nlm.nih.gov/pubmed/25640005 http://dx.doi.org/10.1002/bies.201400113 |
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