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Sources of dynamic variability in NF-κB signal transduction: A mechanistic model

The transcription factor NF-κB (p65/p50) plays a central role in the coordination of cellular responses by activating the transcription of numerous target genes. The precise role of the dynamics of NF-κB signalling in regulating gene expression is still an open question. Here, we show that besides e...

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Detalles Bibliográficos
Autores principales: Mothes, Janina, Busse, Dorothea, Kofahl, Bente, Wolf, Jana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Blackwell Publishing Ltd 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4409097/
https://www.ncbi.nlm.nih.gov/pubmed/25640005
http://dx.doi.org/10.1002/bies.201400113
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author Mothes, Janina
Busse, Dorothea
Kofahl, Bente
Wolf, Jana
author_facet Mothes, Janina
Busse, Dorothea
Kofahl, Bente
Wolf, Jana
author_sort Mothes, Janina
collection PubMed
description The transcription factor NF-κB (p65/p50) plays a central role in the coordination of cellular responses by activating the transcription of numerous target genes. The precise role of the dynamics of NF-κB signalling in regulating gene expression is still an open question. Here, we show that besides external stimulation intracellular parameters can influence the dynamics of NF-κB. By applying mathematical modelling and bifurcation analyses, we show that NF-κB is capable of exhibiting different types of dynamics in response to the same stimulus. We identified the total NF-κB concentration and the IκBα transcription rate constant as two critical parameters that modulate the dynamics and the fold change of NF-κB. Both parameters might vary as a result of cell-to-cell variability. The regulation of the IκBα transcription rate constant, e.g. by co-factors, provides the possibility of regulating the NF-κB dynamics by crosstalk.
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spelling pubmed-44090972015-04-29 Sources of dynamic variability in NF-κB signal transduction: A mechanistic model Mothes, Janina Busse, Dorothea Kofahl, Bente Wolf, Jana Bioessays Prospects & Overviews The transcription factor NF-κB (p65/p50) plays a central role in the coordination of cellular responses by activating the transcription of numerous target genes. The precise role of the dynamics of NF-κB signalling in regulating gene expression is still an open question. Here, we show that besides external stimulation intracellular parameters can influence the dynamics of NF-κB. By applying mathematical modelling and bifurcation analyses, we show that NF-κB is capable of exhibiting different types of dynamics in response to the same stimulus. We identified the total NF-κB concentration and the IκBα transcription rate constant as two critical parameters that modulate the dynamics and the fold change of NF-κB. Both parameters might vary as a result of cell-to-cell variability. The regulation of the IκBα transcription rate constant, e.g. by co-factors, provides the possibility of regulating the NF-κB dynamics by crosstalk. Blackwell Publishing Ltd 2015-04 2015-01-30 /pmc/articles/PMC4409097/ /pubmed/25640005 http://dx.doi.org/10.1002/bies.201400113 Text en © 2015 The Authors. Bioessays published by WILEY Periodicals, Inc. http://creativecommons.org/licenses/by-nc/4.0/ This is an open access article under the terms of the Creative Commons Attribution-NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Prospects & Overviews
Mothes, Janina
Busse, Dorothea
Kofahl, Bente
Wolf, Jana
Sources of dynamic variability in NF-κB signal transduction: A mechanistic model
title Sources of dynamic variability in NF-κB signal transduction: A mechanistic model
title_full Sources of dynamic variability in NF-κB signal transduction: A mechanistic model
title_fullStr Sources of dynamic variability in NF-κB signal transduction: A mechanistic model
title_full_unstemmed Sources of dynamic variability in NF-κB signal transduction: A mechanistic model
title_short Sources of dynamic variability in NF-κB signal transduction: A mechanistic model
title_sort sources of dynamic variability in nf-κb signal transduction: a mechanistic model
topic Prospects & Overviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4409097/
https://www.ncbi.nlm.nih.gov/pubmed/25640005
http://dx.doi.org/10.1002/bies.201400113
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