Cargando…
AllelicImbalance: an R/ bioconductor package for detecting, managing, and visualizing allele expression imbalance data from RNA sequencing
BACKGROUND: One aspect in which RNA sequencing is more valuable than microarray-based methods is the ability to examine the allelic imbalance of the expression of a gene. This process is often a complex task that entails quality control, alignment, and the counting of reads over heterozygous single-...
Autores principales: | Gådin, Jesper R., van’t Hooft, Ferdinand M., Eriksson, Per, Folkersen, Lasse |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4465016/ https://www.ncbi.nlm.nih.gov/pubmed/26066318 http://dx.doi.org/10.1186/s12859-015-0620-2 |
Ejemplares similares
-
Comparison of quantitative trait loci methods: Total expression and allelic imbalance method in brain RNA-seq
por: Gådin, Jesper R., et al.
Publicado: (2019) -
SEESAW: detecting isoform-level allelic imbalance accounting for inferential uncertainty
por: Wu, Euphy Y., et al.
Publicado: (2023) -
EnrichedHeatmap: an R/Bioconductor package for comprehensive visualization of genomic signal associations
por: Gu, Zuguang, et al.
Publicado: (2018) -
spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data
por: Pardo, Brenda, et al.
Publicado: (2022) -
GSAR: Bioconductor package for Gene Set analysis in R
por: Rahmatallah, Yasir, et al.
Publicado: (2017)