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An Integer Programming Formulation of the Minimum Common String Partition Problem

We consider the problem of finding a minimum common string partition (MCSP) of two strings, which is an NP-hard problem. The MCSP problem is closely related to genome comparison and rearrangement, an important field in Computational Biology. In this paper, we map the MCSP problem into a graph applyi...

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Detalles Bibliográficos
Autores principales: Ferdous, S. M., Rahman, M. Sohel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489654/
https://www.ncbi.nlm.nih.gov/pubmed/26134848
http://dx.doi.org/10.1371/journal.pone.0130266