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Cdt1-binding protein GRWD1 is a novel histone-binding protein that facilitates MCM loading through its influence on chromatin architecture

Efficient pre-replication complex (pre-RC) formation on chromatin templates is crucial for the maintenance of genome integrity. However, the regulation of chromatin dynamics during this process has remained elusive. We found that a conserved protein, GRWD1 (glutamate-rich WD40 repeat containing 1),...

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Autores principales: Sugimoto, Nozomi, Maehara, Kazumitsu, Yoshida, Kazumasa, Yasukouchi, Shuhei, Osano, Satoko, Watanabe, Shinya, Aizawa, Masahiro, Yugawa, Takashi, Kiyono, Tohru, Kurumizaka, Hitoshi, Ohkawa, Yasuyuki, Fujita, Masatoshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4499137/
https://www.ncbi.nlm.nih.gov/pubmed/25990725
http://dx.doi.org/10.1093/nar/gkv509
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author Sugimoto, Nozomi
Maehara, Kazumitsu
Yoshida, Kazumasa
Yasukouchi, Shuhei
Osano, Satoko
Watanabe, Shinya
Aizawa, Masahiro
Yugawa, Takashi
Kiyono, Tohru
Kurumizaka, Hitoshi
Ohkawa, Yasuyuki
Fujita, Masatoshi
author_facet Sugimoto, Nozomi
Maehara, Kazumitsu
Yoshida, Kazumasa
Yasukouchi, Shuhei
Osano, Satoko
Watanabe, Shinya
Aizawa, Masahiro
Yugawa, Takashi
Kiyono, Tohru
Kurumizaka, Hitoshi
Ohkawa, Yasuyuki
Fujita, Masatoshi
author_sort Sugimoto, Nozomi
collection PubMed
description Efficient pre-replication complex (pre-RC) formation on chromatin templates is crucial for the maintenance of genome integrity. However, the regulation of chromatin dynamics during this process has remained elusive. We found that a conserved protein, GRWD1 (glutamate-rich WD40 repeat containing 1), binds to two representative replication origins specifically during G1 phase in a CDC6- and Cdt1-dependent manner, and that depletion of GRWD1 reduces loading of MCM but not CDC6 and Cdt1. Furthermore, chromatin immunoprecipitation coupled with high-throughput sequencing (Seq) revealed significant genome-wide co-localization of GRWD1 with CDC6. We found that GRWD1 has histone-binding activity. To investigate the effect of GRWD1 on chromatin architecture, we used formaldehyde-assisted isolation of regulatory elements (FAIRE)-seq or FAIRE-quantitative PCR analyses, and the results suggest that GRWD1 regulates chromatin openness at specific chromatin locations. Taken together, these findings suggest that GRWD1 may be a novel histone-binding protein that regulates chromatin dynamics and MCM loading at replication origins.
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spelling pubmed-44991372015-09-28 Cdt1-binding protein GRWD1 is a novel histone-binding protein that facilitates MCM loading through its influence on chromatin architecture Sugimoto, Nozomi Maehara, Kazumitsu Yoshida, Kazumasa Yasukouchi, Shuhei Osano, Satoko Watanabe, Shinya Aizawa, Masahiro Yugawa, Takashi Kiyono, Tohru Kurumizaka, Hitoshi Ohkawa, Yasuyuki Fujita, Masatoshi Nucleic Acids Res Genome Integrity, Repair and Replication Efficient pre-replication complex (pre-RC) formation on chromatin templates is crucial for the maintenance of genome integrity. However, the regulation of chromatin dynamics during this process has remained elusive. We found that a conserved protein, GRWD1 (glutamate-rich WD40 repeat containing 1), binds to two representative replication origins specifically during G1 phase in a CDC6- and Cdt1-dependent manner, and that depletion of GRWD1 reduces loading of MCM but not CDC6 and Cdt1. Furthermore, chromatin immunoprecipitation coupled with high-throughput sequencing (Seq) revealed significant genome-wide co-localization of GRWD1 with CDC6. We found that GRWD1 has histone-binding activity. To investigate the effect of GRWD1 on chromatin architecture, we used formaldehyde-assisted isolation of regulatory elements (FAIRE)-seq or FAIRE-quantitative PCR analyses, and the results suggest that GRWD1 regulates chromatin openness at specific chromatin locations. Taken together, these findings suggest that GRWD1 may be a novel histone-binding protein that regulates chromatin dynamics and MCM loading at replication origins. Oxford University Press 2015-07-13 2015-05-18 /pmc/articles/PMC4499137/ /pubmed/25990725 http://dx.doi.org/10.1093/nar/gkv509 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Genome Integrity, Repair and Replication
Sugimoto, Nozomi
Maehara, Kazumitsu
Yoshida, Kazumasa
Yasukouchi, Shuhei
Osano, Satoko
Watanabe, Shinya
Aizawa, Masahiro
Yugawa, Takashi
Kiyono, Tohru
Kurumizaka, Hitoshi
Ohkawa, Yasuyuki
Fujita, Masatoshi
Cdt1-binding protein GRWD1 is a novel histone-binding protein that facilitates MCM loading through its influence on chromatin architecture
title Cdt1-binding protein GRWD1 is a novel histone-binding protein that facilitates MCM loading through its influence on chromatin architecture
title_full Cdt1-binding protein GRWD1 is a novel histone-binding protein that facilitates MCM loading through its influence on chromatin architecture
title_fullStr Cdt1-binding protein GRWD1 is a novel histone-binding protein that facilitates MCM loading through its influence on chromatin architecture
title_full_unstemmed Cdt1-binding protein GRWD1 is a novel histone-binding protein that facilitates MCM loading through its influence on chromatin architecture
title_short Cdt1-binding protein GRWD1 is a novel histone-binding protein that facilitates MCM loading through its influence on chromatin architecture
title_sort cdt1-binding protein grwd1 is a novel histone-binding protein that facilitates mcm loading through its influence on chromatin architecture
topic Genome Integrity, Repair and Replication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4499137/
https://www.ncbi.nlm.nih.gov/pubmed/25990725
http://dx.doi.org/10.1093/nar/gkv509
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