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Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA
Ion channels catalyze ionic permeation across membranes via water-filled pores. To understand how changes in intracellular magnesium concentration regulate the influx of Mg(2+) into cells, we examine early events in the relaxation of Mg(2+) channel CorA toward its open state using massively-repeated...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4504495/ https://www.ncbi.nlm.nih.gov/pubmed/26181442 http://dx.doi.org/10.1371/journal.pcbi.1004303 |
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author | Neale, Chris Chakrabarti, Nilmadhab Pomorski, Pawel Pai, Emil F. Pomès, Régis |
author_facet | Neale, Chris Chakrabarti, Nilmadhab Pomorski, Pawel Pai, Emil F. Pomès, Régis |
author_sort | Neale, Chris |
collection | PubMed |
description | Ion channels catalyze ionic permeation across membranes via water-filled pores. To understand how changes in intracellular magnesium concentration regulate the influx of Mg(2+) into cells, we examine early events in the relaxation of Mg(2+) channel CorA toward its open state using massively-repeated molecular dynamics simulations conducted either with or without regulatory ions. The pore of CorA contains a 2-nm-long hydrophobic bottleneck which remained dehydrated in most simulations. However, rapid hydration or “wetting” events concurrent with small-amplitude fluctuations in pore diameter occurred spontaneously and reversibly. In the absence of regulatory ions, wetting transitions are more likely and include a wet state that is significantly more stable and more hydrated. The free energy profile for Mg(2+) permeation presents a barrier whose magnitude is anticorrelated to pore diameter and the extent of hydrophobic hydration. These findings support an allosteric mechanism whereby wetting of a hydrophobic gate couples changes in intracellular magnesium concentration to the onset of ionic conduction. |
format | Online Article Text |
id | pubmed-4504495 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45044952015-07-17 Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA Neale, Chris Chakrabarti, Nilmadhab Pomorski, Pawel Pai, Emil F. Pomès, Régis PLoS Comput Biol Research Article Ion channels catalyze ionic permeation across membranes via water-filled pores. To understand how changes in intracellular magnesium concentration regulate the influx of Mg(2+) into cells, we examine early events in the relaxation of Mg(2+) channel CorA toward its open state using massively-repeated molecular dynamics simulations conducted either with or without regulatory ions. The pore of CorA contains a 2-nm-long hydrophobic bottleneck which remained dehydrated in most simulations. However, rapid hydration or “wetting” events concurrent with small-amplitude fluctuations in pore diameter occurred spontaneously and reversibly. In the absence of regulatory ions, wetting transitions are more likely and include a wet state that is significantly more stable and more hydrated. The free energy profile for Mg(2+) permeation presents a barrier whose magnitude is anticorrelated to pore diameter and the extent of hydrophobic hydration. These findings support an allosteric mechanism whereby wetting of a hydrophobic gate couples changes in intracellular magnesium concentration to the onset of ionic conduction. Public Library of Science 2015-07-16 /pmc/articles/PMC4504495/ /pubmed/26181442 http://dx.doi.org/10.1371/journal.pcbi.1004303 Text en © 2015 Neale et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Neale, Chris Chakrabarti, Nilmadhab Pomorski, Pawel Pai, Emil F. Pomès, Régis Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA |
title | Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA |
title_full | Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA |
title_fullStr | Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA |
title_full_unstemmed | Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA |
title_short | Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA |
title_sort | hydrophobic gating of ion permeation in magnesium channel cora |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4504495/ https://www.ncbi.nlm.nih.gov/pubmed/26181442 http://dx.doi.org/10.1371/journal.pcbi.1004303 |
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