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Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA

Ion channels catalyze ionic permeation across membranes via water-filled pores. To understand how changes in intracellular magnesium concentration regulate the influx of Mg(2+) into cells, we examine early events in the relaxation of Mg(2+) channel CorA toward its open state using massively-repeated...

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Autores principales: Neale, Chris, Chakrabarti, Nilmadhab, Pomorski, Pawel, Pai, Emil F., Pomès, Régis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4504495/
https://www.ncbi.nlm.nih.gov/pubmed/26181442
http://dx.doi.org/10.1371/journal.pcbi.1004303
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author Neale, Chris
Chakrabarti, Nilmadhab
Pomorski, Pawel
Pai, Emil F.
Pomès, Régis
author_facet Neale, Chris
Chakrabarti, Nilmadhab
Pomorski, Pawel
Pai, Emil F.
Pomès, Régis
author_sort Neale, Chris
collection PubMed
description Ion channels catalyze ionic permeation across membranes via water-filled pores. To understand how changes in intracellular magnesium concentration regulate the influx of Mg(2+) into cells, we examine early events in the relaxation of Mg(2+) channel CorA toward its open state using massively-repeated molecular dynamics simulations conducted either with or without regulatory ions. The pore of CorA contains a 2-nm-long hydrophobic bottleneck which remained dehydrated in most simulations. However, rapid hydration or “wetting” events concurrent with small-amplitude fluctuations in pore diameter occurred spontaneously and reversibly. In the absence of regulatory ions, wetting transitions are more likely and include a wet state that is significantly more stable and more hydrated. The free energy profile for Mg(2+) permeation presents a barrier whose magnitude is anticorrelated to pore diameter and the extent of hydrophobic hydration. These findings support an allosteric mechanism whereby wetting of a hydrophobic gate couples changes in intracellular magnesium concentration to the onset of ionic conduction.
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spelling pubmed-45044952015-07-17 Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA Neale, Chris Chakrabarti, Nilmadhab Pomorski, Pawel Pai, Emil F. Pomès, Régis PLoS Comput Biol Research Article Ion channels catalyze ionic permeation across membranes via water-filled pores. To understand how changes in intracellular magnesium concentration regulate the influx of Mg(2+) into cells, we examine early events in the relaxation of Mg(2+) channel CorA toward its open state using massively-repeated molecular dynamics simulations conducted either with or without regulatory ions. The pore of CorA contains a 2-nm-long hydrophobic bottleneck which remained dehydrated in most simulations. However, rapid hydration or “wetting” events concurrent with small-amplitude fluctuations in pore diameter occurred spontaneously and reversibly. In the absence of regulatory ions, wetting transitions are more likely and include a wet state that is significantly more stable and more hydrated. The free energy profile for Mg(2+) permeation presents a barrier whose magnitude is anticorrelated to pore diameter and the extent of hydrophobic hydration. These findings support an allosteric mechanism whereby wetting of a hydrophobic gate couples changes in intracellular magnesium concentration to the onset of ionic conduction. Public Library of Science 2015-07-16 /pmc/articles/PMC4504495/ /pubmed/26181442 http://dx.doi.org/10.1371/journal.pcbi.1004303 Text en © 2015 Neale et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Neale, Chris
Chakrabarti, Nilmadhab
Pomorski, Pawel
Pai, Emil F.
Pomès, Régis
Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA
title Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA
title_full Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA
title_fullStr Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA
title_full_unstemmed Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA
title_short Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA
title_sort hydrophobic gating of ion permeation in magnesium channel cora
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4504495/
https://www.ncbi.nlm.nih.gov/pubmed/26181442
http://dx.doi.org/10.1371/journal.pcbi.1004303
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