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Structural basis for catalytically restrictive dynamics of a high-energy enzyme state

An emerging paradigm in enzymology is that transient high-energy structural states play crucial roles in enzymatic reaction cycles. Generally, these high-energy or ‘invisible' states cannot be studied directly at atomic resolution using existing structural and spectroscopic techniques owing to...

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Autores principales: Kovermann, Michael, Ådén, Jörgen, Grundström, Christin, Elisabeth Sauer-Eriksson, A., Sauer, Uwe H., Wolf-Watz, Magnus
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Pub. Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4506515/
https://www.ncbi.nlm.nih.gov/pubmed/26138143
http://dx.doi.org/10.1038/ncomms8644
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author Kovermann, Michael
Ådén, Jörgen
Grundström, Christin
Elisabeth Sauer-Eriksson, A.
Sauer, Uwe H.
Wolf-Watz, Magnus
author_facet Kovermann, Michael
Ådén, Jörgen
Grundström, Christin
Elisabeth Sauer-Eriksson, A.
Sauer, Uwe H.
Wolf-Watz, Magnus
author_sort Kovermann, Michael
collection PubMed
description An emerging paradigm in enzymology is that transient high-energy structural states play crucial roles in enzymatic reaction cycles. Generally, these high-energy or ‘invisible' states cannot be studied directly at atomic resolution using existing structural and spectroscopic techniques owing to their low populations or short residence times. Here we report the direct NMR-based detection of the molecular topology and conformational dynamics of a catalytically indispensable high-energy state of an adenylate kinase variant. On the basis of matching energy barriers for conformational dynamics and catalytic turnover, it was found that the enzyme's catalytic activity is governed by its dynamic interconversion between the high-energy state and a ground state structure that was determined by X-ray crystallography. Our results show that it is possible to rationally tune enzymes' conformational dynamics and hence their catalytic power—a key aspect in rational design of enzymes catalysing novel reactions.
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spelling pubmed-45065152015-07-21 Structural basis for catalytically restrictive dynamics of a high-energy enzyme state Kovermann, Michael Ådén, Jörgen Grundström, Christin Elisabeth Sauer-Eriksson, A. Sauer, Uwe H. Wolf-Watz, Magnus Nat Commun Article An emerging paradigm in enzymology is that transient high-energy structural states play crucial roles in enzymatic reaction cycles. Generally, these high-energy or ‘invisible' states cannot be studied directly at atomic resolution using existing structural and spectroscopic techniques owing to their low populations or short residence times. Here we report the direct NMR-based detection of the molecular topology and conformational dynamics of a catalytically indispensable high-energy state of an adenylate kinase variant. On the basis of matching energy barriers for conformational dynamics and catalytic turnover, it was found that the enzyme's catalytic activity is governed by its dynamic interconversion between the high-energy state and a ground state structure that was determined by X-ray crystallography. Our results show that it is possible to rationally tune enzymes' conformational dynamics and hence their catalytic power—a key aspect in rational design of enzymes catalysing novel reactions. Nature Pub. Group 2015-07-03 /pmc/articles/PMC4506515/ /pubmed/26138143 http://dx.doi.org/10.1038/ncomms8644 Text en Copyright © 2015, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Kovermann, Michael
Ådén, Jörgen
Grundström, Christin
Elisabeth Sauer-Eriksson, A.
Sauer, Uwe H.
Wolf-Watz, Magnus
Structural basis for catalytically restrictive dynamics of a high-energy enzyme state
title Structural basis for catalytically restrictive dynamics of a high-energy enzyme state
title_full Structural basis for catalytically restrictive dynamics of a high-energy enzyme state
title_fullStr Structural basis for catalytically restrictive dynamics of a high-energy enzyme state
title_full_unstemmed Structural basis for catalytically restrictive dynamics of a high-energy enzyme state
title_short Structural basis for catalytically restrictive dynamics of a high-energy enzyme state
title_sort structural basis for catalytically restrictive dynamics of a high-energy enzyme state
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4506515/
https://www.ncbi.nlm.nih.gov/pubmed/26138143
http://dx.doi.org/10.1038/ncomms8644
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