Halvade: scalable sequence analysis with MapReduce

Motivation: Post-sequencing DNA analysis typically consists of read mapping followed by variant calling. Especially for whole genome sequencing, this computational step is very time-consuming, even when using multithreading on a multi-core machine. Results: We present Halvade, a framework that enabl...

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Detalles Bibliográficos
Autores principales: Decap, Dries, Reumers, Joke, Herzeel, Charlotte, Costanza, Pascal, Fostier, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Original Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4514927/
https://www.ncbi.nlm.nih.gov/pubmed/25819078
http://dx.doi.org/10.1093/bioinformatics/btv179

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4514927/
https://www.ncbi.nlm.nih.gov/pubmed/25819078
http://dx.doi.org/10.1093/bioinformatics/btv179

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