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Genotype and Haplotype Analyses of TP53 Gene in Breast Cancer Patients: Association with Risk and Clinical Outcomes
Variations in the TP53 gene have been suggested to play a role in many cancers, including breast. We previously observed an association between TP53 haplotypes based on four polymorphisms (rs17878362, rs1042522, rs12947788, and rs17884306) and the risk of colorectal and pancreatic cancer. Based on t...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4520609/ https://www.ncbi.nlm.nih.gov/pubmed/26226484 http://dx.doi.org/10.1371/journal.pone.0134463 |
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author | Vymetalkova, Veronika Soucek, Pavel Kunicka, Tereza Jiraskova, Katerina Brynychova, Veronika Pardini, Barbara Novosadova, Vendula Polivkova, Zdena Kubackova, Katerina Kozevnikovova, Renata Ambrus, Miloslav Vodickova, Ludmila Naccarati, Alessio Vodicka, Pavel |
author_facet | Vymetalkova, Veronika Soucek, Pavel Kunicka, Tereza Jiraskova, Katerina Brynychova, Veronika Pardini, Barbara Novosadova, Vendula Polivkova, Zdena Kubackova, Katerina Kozevnikovova, Renata Ambrus, Miloslav Vodickova, Ludmila Naccarati, Alessio Vodicka, Pavel |
author_sort | Vymetalkova, Veronika |
collection | PubMed |
description | Variations in the TP53 gene have been suggested to play a role in many cancers, including breast. We previously observed an association between TP53 haplotypes based on four polymorphisms (rs17878362, rs1042522, rs12947788, and rs17884306) and the risk of colorectal and pancreatic cancer. Based on these results, in the present study, we have investigated the same polymorphisms and their haplotypes in 705 breast cancer cases and 611 healthy controls in relation to the disease risk, histopathological features of the tumor and clinical outcomes. In comparison to the most common haplotype A(1)-G-C-G, all the other identified haplotypes were globally associated with a significantly decreased breast cancer risk (P = 0.006). In particular, the A(2)-G-C-G haplotype was associated with a marked decreased risk of breast cancer when compared with the common haplotype (P = 0.0001). Moreover, rs1042522 in patients carrying the GC genotype and receiving only the anthracycline-based chemotherapy was associated with both overall and disease-free survival (recessive model for overall survival HR = 0.30 95% CI 0.11–0.80, P = 0.02 and for disease-free survival HR = 0.42 95% CI 0.21–0.84, P = 0.01). Present results suggest common genetic features in the susceptibility to breast and gastrointestinal cancers in respect to TP53 variations. In fact, similar haplotype distributions were observed for breast, colorectal, and pancreatic patients in associations with cancer risk. Rs1042522 polymorphism (even after applying the Dunn-Bonferroni correction for multiple testing) appears to be an independent prognostic marker in breast cancer patients. |
format | Online Article Text |
id | pubmed-4520609 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45206092015-08-06 Genotype and Haplotype Analyses of TP53 Gene in Breast Cancer Patients: Association with Risk and Clinical Outcomes Vymetalkova, Veronika Soucek, Pavel Kunicka, Tereza Jiraskova, Katerina Brynychova, Veronika Pardini, Barbara Novosadova, Vendula Polivkova, Zdena Kubackova, Katerina Kozevnikovova, Renata Ambrus, Miloslav Vodickova, Ludmila Naccarati, Alessio Vodicka, Pavel PLoS One Research Article Variations in the TP53 gene have been suggested to play a role in many cancers, including breast. We previously observed an association between TP53 haplotypes based on four polymorphisms (rs17878362, rs1042522, rs12947788, and rs17884306) and the risk of colorectal and pancreatic cancer. Based on these results, in the present study, we have investigated the same polymorphisms and their haplotypes in 705 breast cancer cases and 611 healthy controls in relation to the disease risk, histopathological features of the tumor and clinical outcomes. In comparison to the most common haplotype A(1)-G-C-G, all the other identified haplotypes were globally associated with a significantly decreased breast cancer risk (P = 0.006). In particular, the A(2)-G-C-G haplotype was associated with a marked decreased risk of breast cancer when compared with the common haplotype (P = 0.0001). Moreover, rs1042522 in patients carrying the GC genotype and receiving only the anthracycline-based chemotherapy was associated with both overall and disease-free survival (recessive model for overall survival HR = 0.30 95% CI 0.11–0.80, P = 0.02 and for disease-free survival HR = 0.42 95% CI 0.21–0.84, P = 0.01). Present results suggest common genetic features in the susceptibility to breast and gastrointestinal cancers in respect to TP53 variations. In fact, similar haplotype distributions were observed for breast, colorectal, and pancreatic patients in associations with cancer risk. Rs1042522 polymorphism (even after applying the Dunn-Bonferroni correction for multiple testing) appears to be an independent prognostic marker in breast cancer patients. Public Library of Science 2015-07-30 /pmc/articles/PMC4520609/ /pubmed/26226484 http://dx.doi.org/10.1371/journal.pone.0134463 Text en © 2015 Vymetalkova et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Vymetalkova, Veronika Soucek, Pavel Kunicka, Tereza Jiraskova, Katerina Brynychova, Veronika Pardini, Barbara Novosadova, Vendula Polivkova, Zdena Kubackova, Katerina Kozevnikovova, Renata Ambrus, Miloslav Vodickova, Ludmila Naccarati, Alessio Vodicka, Pavel Genotype and Haplotype Analyses of TP53 Gene in Breast Cancer Patients: Association with Risk and Clinical Outcomes |
title | Genotype and Haplotype Analyses of TP53 Gene in Breast Cancer Patients: Association with Risk and Clinical Outcomes |
title_full | Genotype and Haplotype Analyses of TP53 Gene in Breast Cancer Patients: Association with Risk and Clinical Outcomes |
title_fullStr | Genotype and Haplotype Analyses of TP53 Gene in Breast Cancer Patients: Association with Risk and Clinical Outcomes |
title_full_unstemmed | Genotype and Haplotype Analyses of TP53 Gene in Breast Cancer Patients: Association with Risk and Clinical Outcomes |
title_short | Genotype and Haplotype Analyses of TP53 Gene in Breast Cancer Patients: Association with Risk and Clinical Outcomes |
title_sort | genotype and haplotype analyses of tp53 gene in breast cancer patients: association with risk and clinical outcomes |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4520609/ https://www.ncbi.nlm.nih.gov/pubmed/26226484 http://dx.doi.org/10.1371/journal.pone.0134463 |
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