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Chi8: a GPU program for detecting significant interacting SNPs with the Chi-square 8-df test
BACKGROUND: Determining interacting SNPs in genome-wide association studies is computationally expensive yet of considerable interest in genomics. FINDINGS: We present a program Chi8 that calculates the Chi-square 8 degree of freedom test between all pairs of SNPs in a brute force manner on a Graphi...
| Autores principales: | , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
BioMed Central
2015
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4568583/ https://www.ncbi.nlm.nih.gov/pubmed/26369336 http://dx.doi.org/10.1186/s13104-015-1392-5 |