Cargando…

Structural dynamics of E. coli single-stranded DNA binding protein reveal DNA wrapping and unwrapping pathways

Escherichia coli single-stranded (ss)DNA binding (SSB) protein mediates genome maintenance processes by regulating access to ssDNA. This homotetrameric protein wraps ssDNA in multiple distinct binding modes that may be used selectively in different DNA processes, and whose detailed wrapping topologi...

Descripción completa

Detalles Bibliográficos
Autores principales:	Suksombat, Sukrit, Khafizov, Rustem, Kozlov, Alexander G, Lohman, Timothy M, Chemla, Yann R
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	eLife Sciences Publications, Ltd 2015
Materias:	Biophysics and Structural Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4582245/ https://www.ncbi.nlm.nih.gov/pubmed/26305498 http://dx.doi.org/10.7554/eLife.08193

Ejemplares similares

Switch-like control of helicase processivity by single-stranded DNA binding protein
por: Stekas, Barbara, et al.
Publicado: (2021)

Escherichia coli swimming is robust against variations in flagellar number
por: Mears, Patrick J, et al.
Publicado: (2014)

cryo-EM structures of the E. coli replicative DNA polymerase reveal its dynamic interactions with the DNA sliding clamp, exonuclease and τ
por: Fernandez-Leiro, Rafael, et al.
Publicado: (2015)

Sequence-dependent base pair stepping dynamics in XPD helicase unwinding
por: Qi, Zhi, et al.
Publicado: (2013)

HIV restriction factor APOBEC3G binds in multiple steps and conformations to search and deaminate single-stranded DNA
por: Morse, Michael, et al.
Publicado: (2019)

Mechanism of RecO recruitment to DNA by single-stranded DNA binding protein
por: Ryzhikov, Mikhail, et al.
Publicado: (2011)

Escherichia coli antitoxin MazE as transcription factor: insights into MazE-DNA binding
por: Zorzini, Valentina, et al.
Publicado: (2015)

Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein
por: Ghalei, Homa, et al.
Publicado: (2014)

Intramolecular binding mode of the C-terminus of Escherichia coli single-stranded DNA binding protein determined by nuclear magnetic resonance spectroscopy
por: Shishmarev, Dmitry, et al.
Publicado: (2014)

Distortion of double-stranded DNA structure by the binding of the restriction DNA glycosylase R.PabI
por: Miyazono, Ken-ichi, et al.
Publicado: (2020)

Three-stranded antiviral attack
por: Patel, Jenish R, et al.
Publicado: (2014)

Mechanism for priming DNA synthesis by yeast DNA Polymerase α
por: Perera, Rajika L, et al.
Publicado: (2013)

Twisting of the DNA-binding surface by a β-strand-bearing proline modulates DNA gyrase activity
por: Hsieh, Tung-Ju, et al.
Publicado: (2010)

Structural transitions during the cooperative assembly of baculovirus single-stranded DNA-binding protein on ssDNA
por: Yin, Jiayi, et al.
Publicado: (2022)

Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK
por: Wang, Na, et al.
Publicado: (2019)

Is a fully wrapped SSB–DNA complex essential for Escherichia coli survival?
por: Waldman, Vincent M., et al.
Publicado: (2016)

CryoEM structures of open dimers of gyrase A in complex with DNA illuminate mechanism of strand passage
por: Soczek, Katarzyna M, et al.
Publicado: (2018)

Periodic DNA patrolling underlies diverse functions of Pif1 on R-loops and G-rich DNA
por: Zhou, Ruobo, et al.
Publicado: (2014)

A second DNA binding site on RFC facilitates clamp loading at gapped or nicked DNA
por: Liu, Xingchen, et al.
Publicado: (2022)

Crystal structure of DnaT(84–153)-dT10 ssDNA complex reveals a novel single-stranded DNA binding mode
por: Liu, Zheng, et al.
Publicado: (2014)

Structures of topoisomerase V in complex with DNA reveal unusual DNA-binding mode and novel relaxation mechanism
por: Osterman, Amy, et al.
Publicado: (2022)

The structural basis for dynamic DNA binding and bridging interactions which condense the bacterial centromere
por: Fisher, Gemma LM, et al.
Publicado: (2017)

Double-strand DNA end-binding and sliding of the toroidal CRISPR-associated protein Csn2
por: Arslan, Zihni, et al.
Publicado: (2013)

Structural basis for DNA 5´-end resection by RecJ
por: Cheng, Kaiying, et al.
Publicado: (2016)

Dna2 nuclease-helicase structure, mechanism and regulation by Rpa
por: Zhou, Chun, et al.
Publicado: (2015)

An intercalation-locked parallel-stranded DNA tetraplex
por: Tripathi, Shailesh, et al.
Publicado: (2015)

The structure of Escherichia coli ExoIX—implications for DNA binding and catalysis in flap endonucleases
por: Anstey-Gilbert, Christopher S., et al.
Publicado: (2013)

Selection of chromosomal DNA libraries using a multiplex CRISPR system
por: Ryan, Owen W, et al.
Publicado: (2014)

Single-molecule observation of DNA compaction by meiotic protein SYCP3
por: Syrjänen, Johanna L, et al.
Publicado: (2017)

Assembly principles of a unique cage formed by hexameric and decameric E. coli proteins
por: Malet, Hélène, et al.
Publicado: (2014)

Cryo-EM structures of the autoinhibited E. coli ATP synthase in three rotational states
por: Sobti, Meghna, et al.
Publicado: (2016)

Altering the speed of a DNA packaging motor from bacteriophage T4
por: Lin, Siying, et al.
Publicado: (2017)

The structure of DdrB from Deinococcus: a new fold for single-stranded DNA binding proteins
por: Sugiman-Marangos, Seiji, et al.
Publicado: (2010)

The structure of SV40 large T hexameric helicase in complex with AT-rich origin DNA
por: Gai, Dahai, et al.
Publicado: (2016)

Correction: Assembly principles of a unique cage formed by hexameric and decameric E. coli proteins
por: Malet, Hélène, et al.
Publicado: (2014)

Transient protein-protein interactions perturb E. coli metabolome and cause gene dosage toxicity
por: Bhattacharyya, Sanchari, et al.
Publicado: (2016)

Euler buckling and nonlinear kinking of double-stranded DNA
por: Fields, Alexander P., et al.
Publicado: (2013)

Structural dynamics of double-stranded DNA with epigenome modification
por: Furukawa, Ayako, et al.
Publicado: (2020)

Structural basis for recognition and remodeling of the TBP:DNA:NC2 complex by Mot1
por: Butryn, Agata, et al.
Publicado: (2015)

Structural snapshots of Xer recombination reveal activation by synaptic complex remodeling and DNA bending
por: Bebel, Aleksandra, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_6esfgrf3dgjtvu2ujbcst4aetl