Cargando…

Integrative genomics analysis of genes with biallelic loss and its relation to the expression of mRNA and micro-RNA in esophageal squamous cell carcinoma

BACKGROUND: Genomic instability plays an important role in human cancers. We previously characterized genomic instability in esophageal squamous cell carcinomas (ESCC) in terms of loss of heterozygosity (LOH) and copy number (CN) changes in tumors. In the current study we focus on biallelic loss and...

Descripción completa

Detalles Bibliográficos
Autores principales:	Hu, Nan, Wang, Chaoyu, Clifford, Robert J., Yang, Howard H., Su, Hua, Wang, Lemin, Wang, Yuan, Xu, Yi, Tang, Ze-Zhong, Ding, Ti, Zhang, Tongwu, Goldstein, Alisa M., Giffen, Carol, Lee, Maxwell P., Taylor, Philip R.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2015
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4584010/ https://www.ncbi.nlm.nih.gov/pubmed/26409826 http://dx.doi.org/10.1186/s12864-015-1919-0

Ejemplares similares

Integrated analysis of genome-wide miRNAs and targeted gene expression in esophageal squamous cell carcinoma (ESCC) and relation to prognosis
por: Yang, Howard, et al.
Publicado: (2020)

CSMD1 Shows Complex Patterns of Somatic Copy Number Alterations and Expressions of mRNAs and Target Micro RNAs in Esophageal Squamous Cell Carcinoma
por: Hu, Nan, et al.
Publicado: (2022)

Modified eQTL and Somatic DNA Segment Alterations in Esophageal Squamous Cell Carcinoma for Genes Related to Immunity, DNA Repair, and Inflammation
por: Yang, Howard H., et al.
Publicado: (2022)

Genome wide analysis of DNA copy number neutral loss of heterozygosity (CNNLOH) and its relation to gene expression in esophageal squamous cell carcinoma
por: Hu, Nan, et al.
Publicado: (2010)

Quantitative real-time RT-PCR validation of differential mRNA expression of SPARC, FADD, Fascin, COL7A1, CK4, TGM3, ECM1, PPL and EVPL in esophageal squamous cell carcinoma
por: Hu, Nan, et al.
Publicado: (2006)

Comparison of Global Gene Expression of Gastric Cardia and Noncardia Cancers from a High-Risk Population in China
por: Wang, Gangshi, et al.
Publicado: (2013)

Family history of cancer and risk for esophageal and gastric cancer in Shanxi, China
por: Gao, Ying, et al.
Publicado: (2009)

Genetic Variants in Epidermal Growth Factor Receptor Pathway Genes and Risk of Esophageal Squamous Cell Carcinoma and Gastric Cancer in a Chinese Population
por: Li, Wen-Qing, et al.
Publicado: (2013)

Biomarkers of apoptosis and survival in esophageal squamous cell carcinoma
por: Takikita, Mikiko, et al.
Publicado: (2009)

Genome-wide loss of heterozygosity and copy number alteration in esophageal squamous cell carcinoma using the Affymetrix GeneChip Mapping 10 K array
por: Hu, Nan, et al.
Publicado: (2006)

Bioinformatics-Based Identification of a circRNA-miRNA-mRNA Axis in Esophageal Squamous Cell Carcinomas
por: Wang, Zhaojun, et al.
Publicado: (2020)

An integrated analysis of the effects of microRNA and mRNA on esophageal squamous cell carcinoma
por: YANG, YONG, et al.
Publicado: (2015)

Influence of Genetic Background and Tissue Types on Global DNA Methylation Patterns
por: Yang, Howard H., et al.
Publicado: (2010)

A shared susceptibility locus in PLCE1 at 10q23 for gastric adenocarcinoma and esophageal squamous cell carcinoma
por: Abnet, Christian C, et al.
Publicado: (2010)

Systematic Identification of circRNA–miRNA–mRNA Regulatory Network in Esophageal Squamous Cell Carcinoma
por: Shen, Yi, et al.
Publicado: (2021)

GWAS follow-up study of esophageal squamous cell carcinoma identifies potential genetic loci associated with family history of upper gastrointestinal cancer
por: Song, Xin, et al.
Publicado: (2017)

Bioinformatics-based analysis of the lncRNA–miRNA–mRNA and TF regulatory networks reveals functional genes in esophageal squamous cell carcinoma
por: Ye, Zhimin, et al.
Publicado: (2020)

Identification of Tumor Antigens and Immune Subtypes of Esophageal Squamous Cell Carcinoma for mRNA Vaccine Development
por: Lu, Tong, et al.
Publicado: (2022)

Global Changes in Gene Expression of Barrett's Esophagus Compared to Normal Squamous Esophagus and Gastric Cardia Tissues
por: Hyland, Paula L., et al.
Publicado: (2014)

Interactions of piRNAs with the mRNA of Candidate Genes in Esophageal Squamous Cell Carcinoma
por: Rakhmetullina, Aizhan, et al.
Publicado: (2023)

Molecular Characterization of the Human Stomach Microbiota in Gastric Cancer Patients
por: Yu, Guoqin, et al.
Publicado: (2017)

Identification of crucial miRNAs and genes in esophageal squamous cell carcinoma by miRNA-mRNA integrated analysis
por: Zhong, Xiaowu, et al.
Publicado: (2019)

A Prognostic Model Based on mRNA Expression Analysis of Esophageal Squamous Cell Carcinoma
por: Liu, Ke, et al.
Publicado: (2022)

Construction of differential mRNA-lncRNA crosstalk networks based on ceRNA hypothesis uncover key roles of lncRNAs implicated in esophageal squamous cell carcinoma
por: Yang, Shuang, et al.
Publicado: (2016)

PPI Network Analysis of mRNA Expression Profile of Ezrin Knockdown in Esophageal Squamous Cell Carcinoma
por: Wu, Bingli, et al.
Publicado: (2014)

Comprehensive bioinformatics analysis of the mRNA profile of PLCE1 knockdown in esophageal squamous cell carcinoma
por: Cui, Xiaobin, et al.
Publicado: (2017)

Circular RNA circ‐FIRRE interacts with HNRNPC to promote esophageal squamous cell carcinoma progression by stabilizing GLI2 mRNA
por: Zhou, Yongjia, et al.
Publicado: (2023)

Elevated expression of the RNA-binding protein IGF2BP1 enhances the mRNA stability of INHBA to promote the invasion and migration of esophageal squamous cancer cells
por: Wang, Juan-Juan, et al.
Publicado: (2023)

A combination of mRNA features influence the efficiency of leaderless mRNA translation initiation
por: Bharmal, Mohammed-Husain M, et al.
Publicado: (2021)

Functional analysis of the mRNA profile of neutrophil gelatinase-associated lipocalin overexpression in esophageal squamous cell carcinoma using multiple bioinformatic tools
por: WU, BING-LI, et al.
Publicado: (2014)

RNA sequencing of CD4 T-cells reveals the relationships between lncRNA-mRNA co-expression in elite controller vs. HIV-positive infected patients
por: Chen, Chaoyu, et al.
Publicado: (2020)

Construction of the Six-lncRNA Prognosis Signature as a Novel Biomarker in Esophageal Squamous Cell Carcinoma
por: Zheng, Ze-Jun, et al.
Publicado: (2022)

Integrated Analysis of Long Noncoding RNA and Coding RNA Expression in Esophageal Squamous Cell Carcinoma
por: Cao, Wei, et al.
Publicado: (2013)

Dissection of miRNA-miRNA Interaction in Esophageal Squamous Cell Carcinoma
por: Wu, Bingli, et al.
Publicado: (2013)

Bioinformatics-based identification of miRNAs, mRNA, and regulatory signaling pathways involved in esophageal squamous cell carcinoma
por: Askari, Nahid, et al.
Publicado: (2022)

Low RCAN1.2 mRNA Expression Is Associated with Poor Prognosis of Patients with Esophageal Squamous Cell Carcinoma
por: Yang, Haijun, et al.
Publicado: (2023)

Upregulation of microRNA-98 increases radiosensitivity in esophageal squamous cell carcinoma
por: Jin, Ying-Ying, et al.
Publicado: (2016)

High-efficiency multiplex biallelic heritable editing in Arabidopsis using an RNA virus
por: Nagalakshmi, Ugrappa, et al.
Publicado: (2022)

Long noncoding RNA GK‐IT1 promotes esophageal squamous cell carcinoma by regulating MAPK1 phosphorylation
por: Yang, Xin, et al.
Publicado: (2022)

PABPC1-induced stabilization of IFI27 mRNA promotes angiogenesis and malignant progression in esophageal squamous cell carcinoma through exosomal miRNA-21-5p
por: Zhang, Ying, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_dkin6oic6p5g87j1smo45stkpv