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Exact approaches for scaffolding

This paper presents new structural and algorithmic results around the scaffolding problem, which occurs prominently in next generation sequencing. The problem can be formalized as an optimization problem on a special graph, the "scaffold graph". We prove that the problem is polynomial if t...

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Detalles Bibliográficos
Autores principales: Weller, Mathias, Chateau, Annie, Giroudeau, Rodolphe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4603742/
https://www.ncbi.nlm.nih.gov/pubmed/26451725
http://dx.doi.org/10.1186/1471-2105-16-S14-S2