Cargando…
Identification of Critical Amino Acids Conferring Lethality in VopK, a Type III Effector Protein of Vibrio cholerae: Lessons from Yeast Model System
VopK, a type III effector protein, has been implicated in the pathogenesis of Vibrio cholerae strains belonging to diverse serogroups. Ectopic expression of this protein exhibits strong toxicity in yeast model system. In order to map critical residues in VopK, we scanned the primary sequence guided...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4619451/ https://www.ncbi.nlm.nih.gov/pubmed/26488395 http://dx.doi.org/10.1371/journal.pone.0141038 |
_version_ | 1782397105734680576 |
---|---|
author | Bankapalli, Leela Krishna Mishra, Rahul Chandra Singh, Balvinder Raychaudhuri, Saumya |
author_facet | Bankapalli, Leela Krishna Mishra, Rahul Chandra Singh, Balvinder Raychaudhuri, Saumya |
author_sort | Bankapalli, Leela Krishna |
collection | PubMed |
description | VopK, a type III effector protein, has been implicated in the pathogenesis of Vibrio cholerae strains belonging to diverse serogroups. Ectopic expression of this protein exhibits strong toxicity in yeast model system. In order to map critical residues in VopK, we scanned the primary sequence guided by available data on various toxins and effector proteins. Our in silico analysis of VopK indicated the presence of predicted MCF1-SHE (SHxxxE) serine peptidase domain at the C-terminus region of the protein. Substitution of each of the predicted catalytic triad residues namely Ser(314), His(353) and Glu(357) with alanine resulted in recombinant VopK proteins varying in lethality as evaluated in yeast model system. We observed that replacement of glutamate(357) to alanine causes complete loss in toxicity while substitutions of serine(314) and histidine(353) with alanine exhibited partial loss in toxicity without affecting the stability of variants. In addition, replacement of another conserved serine residue at position 354 (S(354)) within predicted S(314)H(353)E(357) did not affect toxicity of VopK. In essence, combined in silico and site directed mutagenesis, we have identified critical amino acids contributing to the lethal activity of VopK in yeast model system. |
format | Online Article Text |
id | pubmed-4619451 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-46194512015-10-29 Identification of Critical Amino Acids Conferring Lethality in VopK, a Type III Effector Protein of Vibrio cholerae: Lessons from Yeast Model System Bankapalli, Leela Krishna Mishra, Rahul Chandra Singh, Balvinder Raychaudhuri, Saumya PLoS One Research Article VopK, a type III effector protein, has been implicated in the pathogenesis of Vibrio cholerae strains belonging to diverse serogroups. Ectopic expression of this protein exhibits strong toxicity in yeast model system. In order to map critical residues in VopK, we scanned the primary sequence guided by available data on various toxins and effector proteins. Our in silico analysis of VopK indicated the presence of predicted MCF1-SHE (SHxxxE) serine peptidase domain at the C-terminus region of the protein. Substitution of each of the predicted catalytic triad residues namely Ser(314), His(353) and Glu(357) with alanine resulted in recombinant VopK proteins varying in lethality as evaluated in yeast model system. We observed that replacement of glutamate(357) to alanine causes complete loss in toxicity while substitutions of serine(314) and histidine(353) with alanine exhibited partial loss in toxicity without affecting the stability of variants. In addition, replacement of another conserved serine residue at position 354 (S(354)) within predicted S(314)H(353)E(357) did not affect toxicity of VopK. In essence, combined in silico and site directed mutagenesis, we have identified critical amino acids contributing to the lethal activity of VopK in yeast model system. Public Library of Science 2015-10-21 /pmc/articles/PMC4619451/ /pubmed/26488395 http://dx.doi.org/10.1371/journal.pone.0141038 Text en © 2015 Bankapalli et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Bankapalli, Leela Krishna Mishra, Rahul Chandra Singh, Balvinder Raychaudhuri, Saumya Identification of Critical Amino Acids Conferring Lethality in VopK, a Type III Effector Protein of Vibrio cholerae: Lessons from Yeast Model System |
title | Identification of Critical Amino Acids Conferring Lethality in VopK, a Type III Effector Protein of Vibrio cholerae: Lessons from Yeast Model System |
title_full | Identification of Critical Amino Acids Conferring Lethality in VopK, a Type III Effector Protein of Vibrio cholerae: Lessons from Yeast Model System |
title_fullStr | Identification of Critical Amino Acids Conferring Lethality in VopK, a Type III Effector Protein of Vibrio cholerae: Lessons from Yeast Model System |
title_full_unstemmed | Identification of Critical Amino Acids Conferring Lethality in VopK, a Type III Effector Protein of Vibrio cholerae: Lessons from Yeast Model System |
title_short | Identification of Critical Amino Acids Conferring Lethality in VopK, a Type III Effector Protein of Vibrio cholerae: Lessons from Yeast Model System |
title_sort | identification of critical amino acids conferring lethality in vopk, a type iii effector protein of vibrio cholerae: lessons from yeast model system |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4619451/ https://www.ncbi.nlm.nih.gov/pubmed/26488395 http://dx.doi.org/10.1371/journal.pone.0141038 |
work_keys_str_mv | AT bankapallileelakrishna identificationofcriticalaminoacidsconferringlethalityinvopkatypeiiieffectorproteinofvibriocholeraelessonsfromyeastmodelsystem AT mishrarahulchandra identificationofcriticalaminoacidsconferringlethalityinvopkatypeiiieffectorproteinofvibriocholeraelessonsfromyeastmodelsystem AT singhbalvinder identificationofcriticalaminoacidsconferringlethalityinvopkatypeiiieffectorproteinofvibriocholeraelessonsfromyeastmodelsystem AT raychaudhurisaumya identificationofcriticalaminoacidsconferringlethalityinvopkatypeiiieffectorproteinofvibriocholeraelessonsfromyeastmodelsystem |