Heuristic pairwise alignment of de Bruijn graphs to facilitate simultaneous transcript discovery in related organisms from RNA-Seq data

BACKGROUND: The advance of high-throughput sequencing has made it possible to obtain new transcriptomes and study splicing mechanisms in non-model organisms. In these studies, there is often a need to investigate the transcriptomes of two related organisms at the same time in order to find the simil...

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Detalles Bibliográficos
Autores principales: Fu, Shuhua, Tarone, Aaron M, Sze, Sing-Hoi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4652555/
https://www.ncbi.nlm.nih.gov/pubmed/26576690
http://dx.doi.org/10.1186/1471-2164-16-S11-S5

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4652555/
https://www.ncbi.nlm.nih.gov/pubmed/26576690
http://dx.doi.org/10.1186/1471-2164-16-S11-S5

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