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Frequency-based haplotype reconstruction from deep sequencing data of bacterial populations
Clonal populations accumulate mutations over time, resulting in different haplotypes. Deep sequencing of such a population in principle provides information to reconstruct these haplotypes and the frequency at which the haplotypes occur. However, this reconstruction is technically not trivial, espec...
Autores principales: | Pulido-Tamayo, Sergio, Sánchez-Rodríguez, Aminael, Swings, Toon, Van den Bergh, Bram, Dubey, Akanksha, Steenackers, Hans, Michiels, Jan, Fostier, Jan, Marchal, Kathleen |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4652744/ https://www.ncbi.nlm.nih.gov/pubmed/25990729 http://dx.doi.org/10.1093/nar/gkv478 |
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