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Defining an additivity framework for mixture research in inducible whole-cell biosensors

A novel additivity framework for mixture effect modelling in the context of whole cell inducible biosensors has been mathematically developed and implemented in R. The proposed method is a multivariate extension of the effective dose (ED(p)) concept. Specifically, the extension accounts for differen...

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Autores principales: Martin-Betancor, K., Ritz, C., Fernández-Piñas, F., Leganés, F., Rodea-Palomares, I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4660423/
https://www.ncbi.nlm.nih.gov/pubmed/26606975
http://dx.doi.org/10.1038/srep17200
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author Martin-Betancor, K.
Ritz, C.
Fernández-Piñas, F.
Leganés, F.
Rodea-Palomares, I.
author_facet Martin-Betancor, K.
Ritz, C.
Fernández-Piñas, F.
Leganés, F.
Rodea-Palomares, I.
author_sort Martin-Betancor, K.
collection PubMed
description A novel additivity framework for mixture effect modelling in the context of whole cell inducible biosensors has been mathematically developed and implemented in R. The proposed method is a multivariate extension of the effective dose (ED(p)) concept. Specifically, the extension accounts for differential maximal effects among analytes and response inhibition beyond the maximum permissive concentrations. This allows a multivariate extension of Loewe additivity, enabling direct application in a biphasic dose-response framework. The proposed additivity definition was validated, and its applicability illustrated by studying the response of the cyanobacterial biosensor Synechococcus elongatus PCC 7942 pBG2120 to binary mixtures of Zn, Cu, Cd, Ag, Co and Hg. The novel method allowed by the first time to model complete dose-response profiles of an inducible whole cell biosensor to mixtures. In addition, the approach also allowed identification and quantification of departures from additivity (interactions) among analytes. The biosensor was found to respond in a near additive way to heavy metal mixtures except when Hg, Co and Ag were present, in which case strong interactions occurred. The method is a useful contribution for the whole cell biosensors discipline and related areas allowing to perform appropriate assessment of mixture effects in non-monotonic dose-response frameworks
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spelling pubmed-46604232015-12-02 Defining an additivity framework for mixture research in inducible whole-cell biosensors Martin-Betancor, K. Ritz, C. Fernández-Piñas, F. Leganés, F. Rodea-Palomares, I. Sci Rep Article A novel additivity framework for mixture effect modelling in the context of whole cell inducible biosensors has been mathematically developed and implemented in R. The proposed method is a multivariate extension of the effective dose (ED(p)) concept. Specifically, the extension accounts for differential maximal effects among analytes and response inhibition beyond the maximum permissive concentrations. This allows a multivariate extension of Loewe additivity, enabling direct application in a biphasic dose-response framework. The proposed additivity definition was validated, and its applicability illustrated by studying the response of the cyanobacterial biosensor Synechococcus elongatus PCC 7942 pBG2120 to binary mixtures of Zn, Cu, Cd, Ag, Co and Hg. The novel method allowed by the first time to model complete dose-response profiles of an inducible whole cell biosensor to mixtures. In addition, the approach also allowed identification and quantification of departures from additivity (interactions) among analytes. The biosensor was found to respond in a near additive way to heavy metal mixtures except when Hg, Co and Ag were present, in which case strong interactions occurred. The method is a useful contribution for the whole cell biosensors discipline and related areas allowing to perform appropriate assessment of mixture effects in non-monotonic dose-response frameworks Nature Publishing Group 2015-11-26 /pmc/articles/PMC4660423/ /pubmed/26606975 http://dx.doi.org/10.1038/srep17200 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Martin-Betancor, K.
Ritz, C.
Fernández-Piñas, F.
Leganés, F.
Rodea-Palomares, I.
Defining an additivity framework for mixture research in inducible whole-cell biosensors
title Defining an additivity framework for mixture research in inducible whole-cell biosensors
title_full Defining an additivity framework for mixture research in inducible whole-cell biosensors
title_fullStr Defining an additivity framework for mixture research in inducible whole-cell biosensors
title_full_unstemmed Defining an additivity framework for mixture research in inducible whole-cell biosensors
title_short Defining an additivity framework for mixture research in inducible whole-cell biosensors
title_sort defining an additivity framework for mixture research in inducible whole-cell biosensors
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4660423/
https://www.ncbi.nlm.nih.gov/pubmed/26606975
http://dx.doi.org/10.1038/srep17200
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