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Transcriptome analysis of human OXR1 depleted cells reveals its role in regulating the p53 signaling pathway
The oxidation resistance gene 1 (OXR1) is crucial for protecting against oxidative stress; however, its molecular function is unknown. We employed RNA sequencing to examine the role of human OXR1 for genome wide transcription regulation. In total, in non-treated and hydrogen peroxide exposed HeLa ce...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4663793/ https://www.ncbi.nlm.nih.gov/pubmed/26616534 http://dx.doi.org/10.1038/srep17409 |
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author | Yang, Mingyi Lin, Xiaolin Rowe, Alexander Rognes, Torbjørn Eide, Lars Bjørås, Magnar |
author_facet | Yang, Mingyi Lin, Xiaolin Rowe, Alexander Rognes, Torbjørn Eide, Lars Bjørås, Magnar |
author_sort | Yang, Mingyi |
collection | PubMed |
description | The oxidation resistance gene 1 (OXR1) is crucial for protecting against oxidative stress; however, its molecular function is unknown. We employed RNA sequencing to examine the role of human OXR1 for genome wide transcription regulation. In total, in non-treated and hydrogen peroxide exposed HeLa cells, OXR1 depletion resulted in down-regulation of 554 genes and up-regulation of 253 genes. These differentially expressed genes include transcription factors (i.e. HIF1A, SP6, E2F8 and TCF3), antioxidant genes (PRDX4, PTGS1 and CYGB) and numerous genes of the p53 signaling pathway involved in cell-cycle arrest (i.e. cyclin D, CDK6 and RPRM) and apoptosis (i.e. CytC and CASP9). We demonstrated that OXR1 depleted cells undergo cell cycle arrest in G2/M phase during oxidative stress and increase protein expression of the apoptosis initiator protease CASP9. In summary, OXR1 may act as a sensor of cellular oxidative stress to regulate the transcriptional networks required to detoxify reactive oxygen species and modulate cell cycle and apoptosis. |
format | Online Article Text |
id | pubmed-4663793 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-46637932015-12-03 Transcriptome analysis of human OXR1 depleted cells reveals its role in regulating the p53 signaling pathway Yang, Mingyi Lin, Xiaolin Rowe, Alexander Rognes, Torbjørn Eide, Lars Bjørås, Magnar Sci Rep Article The oxidation resistance gene 1 (OXR1) is crucial for protecting against oxidative stress; however, its molecular function is unknown. We employed RNA sequencing to examine the role of human OXR1 for genome wide transcription regulation. In total, in non-treated and hydrogen peroxide exposed HeLa cells, OXR1 depletion resulted in down-regulation of 554 genes and up-regulation of 253 genes. These differentially expressed genes include transcription factors (i.e. HIF1A, SP6, E2F8 and TCF3), antioxidant genes (PRDX4, PTGS1 and CYGB) and numerous genes of the p53 signaling pathway involved in cell-cycle arrest (i.e. cyclin D, CDK6 and RPRM) and apoptosis (i.e. CytC and CASP9). We demonstrated that OXR1 depleted cells undergo cell cycle arrest in G2/M phase during oxidative stress and increase protein expression of the apoptosis initiator protease CASP9. In summary, OXR1 may act as a sensor of cellular oxidative stress to regulate the transcriptional networks required to detoxify reactive oxygen species and modulate cell cycle and apoptosis. Nature Publishing Group 2015-11-30 /pmc/articles/PMC4663793/ /pubmed/26616534 http://dx.doi.org/10.1038/srep17409 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Yang, Mingyi Lin, Xiaolin Rowe, Alexander Rognes, Torbjørn Eide, Lars Bjørås, Magnar Transcriptome analysis of human OXR1 depleted cells reveals its role in regulating the p53 signaling pathway |
title | Transcriptome analysis of human OXR1 depleted cells reveals its role in regulating the p53 signaling pathway |
title_full | Transcriptome analysis of human OXR1 depleted cells reveals its role in regulating the p53 signaling pathway |
title_fullStr | Transcriptome analysis of human OXR1 depleted cells reveals its role in regulating the p53 signaling pathway |
title_full_unstemmed | Transcriptome analysis of human OXR1 depleted cells reveals its role in regulating the p53 signaling pathway |
title_short | Transcriptome analysis of human OXR1 depleted cells reveals its role in regulating the p53 signaling pathway |
title_sort | transcriptome analysis of human oxr1 depleted cells reveals its role in regulating the p53 signaling pathway |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4663793/ https://www.ncbi.nlm.nih.gov/pubmed/26616534 http://dx.doi.org/10.1038/srep17409 |
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