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GenomeTester4: a toolkit for performing basic set operations - union, intersection and complement on k-mer lists

BACKGROUND: K-mer-based methods of genome analysis have attracted great interest because they do not require genome assembly and can be performed directly on sequencing reads. Many analysis tasks require one to compare k-mer lists from different sequences to find words that are either unique to a sp...

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Detalles Bibliográficos
Autores principales: Kaplinski, Lauris, Lepamets, Maarja, Remm, Maido
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4669650/
https://www.ncbi.nlm.nih.gov/pubmed/26640690
http://dx.doi.org/10.1186/s13742-015-0097-y