ScanIndel: a hybrid framework for indel detection via gapped alignment, split reads and de novo assembly

Comprehensive identification of insertions/deletions (indels) across the full size spectrum from second generation sequencing is challenging due to the relatively short read length inherent in the technology. Different indel calling methods exist but are limited in detection to specific sizes with v...

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Detalles Bibliográficos
Autores principales: Yang, Rendong, Nelson, Andrew C., Henzler, Christine, Thyagarajan, Bharat, Silverstein, Kevin A. T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4671222/
https://www.ncbi.nlm.nih.gov/pubmed/26643039
http://dx.doi.org/10.1186/s13073-015-0251-2

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4671222/
https://www.ncbi.nlm.nih.gov/pubmed/26643039
http://dx.doi.org/10.1186/s13073-015-0251-2

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