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LAF: Logic Alignment Free and its application to bacterial genomes classification

Alignment-free algorithms can be used to estimate the similarity of biological sequences and hence are often applied to the phylogenetic reconstruction of genomes. Most of these algorithms rely on comparing the frequency of all the distinct substrings of fixed length (k-mers) that occur in the analy...

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Detalles Bibliográficos
Autores principales: Weitschek, Emanuel, Cunial, Fabio, Felici, Giovanni
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4673791/
https://www.ncbi.nlm.nih.gov/pubmed/26664519
http://dx.doi.org/10.1186/s13040-015-0073-1