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Active site coupling in Plasmodium falciparum GMP synthetase is triggered by domain rotation

GMP synthetase (GMPS), a key enzyme in the purine biosynthetic pathway performs catalysis through a coordinated process across two catalytic pockets for which the mechanism remains unclear. Crystal structures of Plasmodium falciparum GMPS in conjunction with mutational and enzyme kinetic studies rep...

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Autores principales: Ballut, Lionel, Violot, Sébastien, Shivakumaraswamy, Santosh, Thota, Lakshmi Prasoona, Sathya, Manu, Kunala, Jyothirmai, Dijkstra, Bauke W., Terreux, Raphaël, Haser, Richard, Balaram, Hemalatha, Aghajari, Nushin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Pub. Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4673825/
https://www.ncbi.nlm.nih.gov/pubmed/26592566
http://dx.doi.org/10.1038/ncomms9930
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author Ballut, Lionel
Violot, Sébastien
Shivakumaraswamy, Santosh
Thota, Lakshmi Prasoona
Sathya, Manu
Kunala, Jyothirmai
Dijkstra, Bauke W.
Terreux, Raphaël
Haser, Richard
Balaram, Hemalatha
Aghajari, Nushin
author_facet Ballut, Lionel
Violot, Sébastien
Shivakumaraswamy, Santosh
Thota, Lakshmi Prasoona
Sathya, Manu
Kunala, Jyothirmai
Dijkstra, Bauke W.
Terreux, Raphaël
Haser, Richard
Balaram, Hemalatha
Aghajari, Nushin
author_sort Ballut, Lionel
collection PubMed
description GMP synthetase (GMPS), a key enzyme in the purine biosynthetic pathway performs catalysis through a coordinated process across two catalytic pockets for which the mechanism remains unclear. Crystal structures of Plasmodium falciparum GMPS in conjunction with mutational and enzyme kinetic studies reported here provide evidence that an 85° rotation of the GATase domain is required for ammonia channelling and thus for the catalytic activity of this two-domain enzyme. We suggest that conformational changes in helix 371–375 holding catalytic residues and in loop 376–401 along the rotation trajectory trigger the different steps of catalysis, and establish the central role of Glu374 in allostery and inter-domain crosstalk. These studies reveal the mechanism of domain rotation and inter-domain communication, providing a molecular framework for the function of all single polypeptide GMPSs and form a solid basis for rational drug design targeting this therapeutically important enzyme.
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spelling pubmed-46738252015-12-17 Active site coupling in Plasmodium falciparum GMP synthetase is triggered by domain rotation Ballut, Lionel Violot, Sébastien Shivakumaraswamy, Santosh Thota, Lakshmi Prasoona Sathya, Manu Kunala, Jyothirmai Dijkstra, Bauke W. Terreux, Raphaël Haser, Richard Balaram, Hemalatha Aghajari, Nushin Nat Commun Article GMP synthetase (GMPS), a key enzyme in the purine biosynthetic pathway performs catalysis through a coordinated process across two catalytic pockets for which the mechanism remains unclear. Crystal structures of Plasmodium falciparum GMPS in conjunction with mutational and enzyme kinetic studies reported here provide evidence that an 85° rotation of the GATase domain is required for ammonia channelling and thus for the catalytic activity of this two-domain enzyme. We suggest that conformational changes in helix 371–375 holding catalytic residues and in loop 376–401 along the rotation trajectory trigger the different steps of catalysis, and establish the central role of Glu374 in allostery and inter-domain crosstalk. These studies reveal the mechanism of domain rotation and inter-domain communication, providing a molecular framework for the function of all single polypeptide GMPSs and form a solid basis for rational drug design targeting this therapeutically important enzyme. Nature Pub. Group 2015-11-23 /pmc/articles/PMC4673825/ /pubmed/26592566 http://dx.doi.org/10.1038/ncomms9930 Text en Copyright © 2015, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Ballut, Lionel
Violot, Sébastien
Shivakumaraswamy, Santosh
Thota, Lakshmi Prasoona
Sathya, Manu
Kunala, Jyothirmai
Dijkstra, Bauke W.
Terreux, Raphaël
Haser, Richard
Balaram, Hemalatha
Aghajari, Nushin
Active site coupling in Plasmodium falciparum GMP synthetase is triggered by domain rotation
title Active site coupling in Plasmodium falciparum GMP synthetase is triggered by domain rotation
title_full Active site coupling in Plasmodium falciparum GMP synthetase is triggered by domain rotation
title_fullStr Active site coupling in Plasmodium falciparum GMP synthetase is triggered by domain rotation
title_full_unstemmed Active site coupling in Plasmodium falciparum GMP synthetase is triggered by domain rotation
title_short Active site coupling in Plasmodium falciparum GMP synthetase is triggered by domain rotation
title_sort active site coupling in plasmodium falciparum gmp synthetase is triggered by domain rotation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4673825/
https://www.ncbi.nlm.nih.gov/pubmed/26592566
http://dx.doi.org/10.1038/ncomms9930
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