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L1 retrotransposition requires rapid ORF1p oligomerization, a novel coiled coil-dependent property conserved despite extensive remodeling

Detailed mechanistic understanding of L1 retrotransposition is sparse, particularly with respect to ORF1p, a coiled coil-mediated homotrimeric nucleic acid chaperone that can form tightly packed oligomers on nucleic acids. Although the coiled coil motif is highly conserved, it is uniquely susceptibl...

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Autores principales: Naufer, M. Nabuan, Callahan, Kathryn E., Cook, Pamela R., Perez-Gonzalez, Cesar E., Williams, Mark C., Furano, Anthony V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4705668/
https://www.ncbi.nlm.nih.gov/pubmed/26673717
http://dx.doi.org/10.1093/nar/gkv1342
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author Naufer, M. Nabuan
Callahan, Kathryn E.
Cook, Pamela R.
Perez-Gonzalez, Cesar E.
Williams, Mark C.
Furano, Anthony V.
author_facet Naufer, M. Nabuan
Callahan, Kathryn E.
Cook, Pamela R.
Perez-Gonzalez, Cesar E.
Williams, Mark C.
Furano, Anthony V.
author_sort Naufer, M. Nabuan
collection PubMed
description Detailed mechanistic understanding of L1 retrotransposition is sparse, particularly with respect to ORF1p, a coiled coil-mediated homotrimeric nucleic acid chaperone that can form tightly packed oligomers on nucleic acids. Although the coiled coil motif is highly conserved, it is uniquely susceptible to evolutionary change. Here we studied three ORF1 proteins: a modern human one (111p), its resuscitated primate ancestor (555p) and a mosaic modern protein (151p) wherein 9 of the 30 coiled coil substitutions retain their ancestral state. While 111p and 555p equally supported retrotransposition, 151p was inactive. Nonetheless, they were fully active in bulk assays of nucleic acid interactions including chaperone activity. However, single molecule assays showed that 151p trimers form stably bound oligomers on ssDNA at <1/10th the rate of the active proteins, revealing that oligomerization rate is a novel critical parameter of ORF1p activity in retrotransposition conserved for at least the last 25 Myr of primate evolution.
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spelling pubmed-47056682016-01-11 L1 retrotransposition requires rapid ORF1p oligomerization, a novel coiled coil-dependent property conserved despite extensive remodeling Naufer, M. Nabuan Callahan, Kathryn E. Cook, Pamela R. Perez-Gonzalez, Cesar E. Williams, Mark C. Furano, Anthony V. Nucleic Acids Res Molecular Biology Detailed mechanistic understanding of L1 retrotransposition is sparse, particularly with respect to ORF1p, a coiled coil-mediated homotrimeric nucleic acid chaperone that can form tightly packed oligomers on nucleic acids. Although the coiled coil motif is highly conserved, it is uniquely susceptible to evolutionary change. Here we studied three ORF1 proteins: a modern human one (111p), its resuscitated primate ancestor (555p) and a mosaic modern protein (151p) wherein 9 of the 30 coiled coil substitutions retain their ancestral state. While 111p and 555p equally supported retrotransposition, 151p was inactive. Nonetheless, they were fully active in bulk assays of nucleic acid interactions including chaperone activity. However, single molecule assays showed that 151p trimers form stably bound oligomers on ssDNA at <1/10th the rate of the active proteins, revealing that oligomerization rate is a novel critical parameter of ORF1p activity in retrotransposition conserved for at least the last 25 Myr of primate evolution. Oxford University Press 2016-01-08 2015-12-15 /pmc/articles/PMC4705668/ /pubmed/26673717 http://dx.doi.org/10.1093/nar/gkv1342 Text en Published by Oxford University Press on behalf of Nucleic Acids Research 2015. This work is written by (a) US Government employee(s) and is in the public domain in the US.
spellingShingle Molecular Biology
Naufer, M. Nabuan
Callahan, Kathryn E.
Cook, Pamela R.
Perez-Gonzalez, Cesar E.
Williams, Mark C.
Furano, Anthony V.
L1 retrotransposition requires rapid ORF1p oligomerization, a novel coiled coil-dependent property conserved despite extensive remodeling
title L1 retrotransposition requires rapid ORF1p oligomerization, a novel coiled coil-dependent property conserved despite extensive remodeling
title_full L1 retrotransposition requires rapid ORF1p oligomerization, a novel coiled coil-dependent property conserved despite extensive remodeling
title_fullStr L1 retrotransposition requires rapid ORF1p oligomerization, a novel coiled coil-dependent property conserved despite extensive remodeling
title_full_unstemmed L1 retrotransposition requires rapid ORF1p oligomerization, a novel coiled coil-dependent property conserved despite extensive remodeling
title_short L1 retrotransposition requires rapid ORF1p oligomerization, a novel coiled coil-dependent property conserved despite extensive remodeling
title_sort l1 retrotransposition requires rapid orf1p oligomerization, a novel coiled coil-dependent property conserved despite extensive remodeling
topic Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4705668/
https://www.ncbi.nlm.nih.gov/pubmed/26673717
http://dx.doi.org/10.1093/nar/gkv1342
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