HiCUP: pipeline for mapping and processing Hi-C data

HiCUP is a pipeline for processing sequence data generated by Hi-C and Capture Hi-C (CHi-C) experiments, which are techniques used to investigate three-dimensional genomic organisation. The pipeline maps data to a specified reference genome and removes artefacts that would otherwise hinder subsequen...

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Detalles Bibliográficos
Autores principales: Wingett, Steven, Ewels, Philip, Furlan-Magaril, Mayra, Nagano, Takashi, Schoenfelder, Stefan, Fraser, Peter, Andrews, Simon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000Research 2015
Materias:
Software Tool Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4706059/
https://www.ncbi.nlm.nih.gov/pubmed/26835000
http://dx.doi.org/10.12688/f1000research.7334.1

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4706059/
https://www.ncbi.nlm.nih.gov/pubmed/26835000
http://dx.doi.org/10.12688/f1000research.7334.1

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