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Universal Poisson Statistics of mRNAs with Complex Decay Pathways
Messenger RNA (mRNA) dynamics in single cells are often modeled as a memoryless birth-death process with a constant probability per unit time that an mRNA molecule is synthesized or degraded. This predicts a Poisson steady-state distribution of mRNA number, in close agreement with experiments. This...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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The Biophysical Society
2016
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4724633/ https://www.ncbi.nlm.nih.gov/pubmed/26743048 http://dx.doi.org/10.1016/j.bpj.2015.12.001 |
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author | Thattai, Mukund |
author_facet | Thattai, Mukund |
author_sort | Thattai, Mukund |
collection | PubMed |
description | Messenger RNA (mRNA) dynamics in single cells are often modeled as a memoryless birth-death process with a constant probability per unit time that an mRNA molecule is synthesized or degraded. This predicts a Poisson steady-state distribution of mRNA number, in close agreement with experiments. This is surprising, since mRNA decay is known to be a complex process. The paradox is resolved by realizing that the Poisson steady state generalizes to arbitrary mRNA lifetime distributions. A mapping between mRNA dynamics and queueing theory highlights an identifiability problem: a measured Poisson steady state is consistent with a large variety of microscopic models. Here, I provide a rigorous and intuitive explanation for the universality of the Poisson steady state. I show that the mRNA birth-death process and its complex decay variants all take the form of the familiar Poisson law of rare events, under a nonlinear rescaling of time. As a corollary, not only steady-states but also transients are Poisson distributed. Deviations from the Poisson form occur only under two conditions, promoter fluctuations leading to transcriptional bursts or nonindependent degradation of mRNA molecules. These results place severe limits on the power of single-cell experiments to probe microscopic mechanisms, and they highlight the need for single-molecule measurements. |
format | Online Article Text |
id | pubmed-4724633 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | The Biophysical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-47246332017-01-19 Universal Poisson Statistics of mRNAs with Complex Decay Pathways Thattai, Mukund Biophys J Biophysical Letter Messenger RNA (mRNA) dynamics in single cells are often modeled as a memoryless birth-death process with a constant probability per unit time that an mRNA molecule is synthesized or degraded. This predicts a Poisson steady-state distribution of mRNA number, in close agreement with experiments. This is surprising, since mRNA decay is known to be a complex process. The paradox is resolved by realizing that the Poisson steady state generalizes to arbitrary mRNA lifetime distributions. A mapping between mRNA dynamics and queueing theory highlights an identifiability problem: a measured Poisson steady state is consistent with a large variety of microscopic models. Here, I provide a rigorous and intuitive explanation for the universality of the Poisson steady state. I show that the mRNA birth-death process and its complex decay variants all take the form of the familiar Poisson law of rare events, under a nonlinear rescaling of time. As a corollary, not only steady-states but also transients are Poisson distributed. Deviations from the Poisson form occur only under two conditions, promoter fluctuations leading to transcriptional bursts or nonindependent degradation of mRNA molecules. These results place severe limits on the power of single-cell experiments to probe microscopic mechanisms, and they highlight the need for single-molecule measurements. The Biophysical Society 2016-01-19 2015-12-30 /pmc/articles/PMC4724633/ /pubmed/26743048 http://dx.doi.org/10.1016/j.bpj.2015.12.001 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Biophysical Letter Thattai, Mukund Universal Poisson Statistics of mRNAs with Complex Decay Pathways |
title | Universal Poisson Statistics of mRNAs with Complex Decay Pathways |
title_full | Universal Poisson Statistics of mRNAs with Complex Decay Pathways |
title_fullStr | Universal Poisson Statistics of mRNAs with Complex Decay Pathways |
title_full_unstemmed | Universal Poisson Statistics of mRNAs with Complex Decay Pathways |
title_short | Universal Poisson Statistics of mRNAs with Complex Decay Pathways |
title_sort | universal poisson statistics of mrnas with complex decay pathways |
topic | Biophysical Letter |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4724633/ https://www.ncbi.nlm.nih.gov/pubmed/26743048 http://dx.doi.org/10.1016/j.bpj.2015.12.001 |
work_keys_str_mv | AT thattaimukund universalpoissonstatisticsofmrnaswithcomplexdecaypathways |