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Two Genetic Variations in the IRF8 region are associated with Behçet’s disease in Han Chinese
Several modulatory factors in the TLR signaling pathway including IRF3, IRF7, IRF8, TRIM20, MYD88 and NF-κB1 have been associated with autoimmune disease. In this study, we investigated the association of 13 SNPs for these genes with Behçet’s disease (BD) and Vogt-Koyanagi-Harada (VKH) syndrome usin...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4726413/ https://www.ncbi.nlm.nih.gov/pubmed/26794091 http://dx.doi.org/10.1038/srep19651 |
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author | Jiang, Yanni Wang, Hong Yu, Hongsong Li, Lin Xu, Dengfeng Hou, Shengping Kijlstra, Aize Yang, Peizeng |
author_facet | Jiang, Yanni Wang, Hong Yu, Hongsong Li, Lin Xu, Dengfeng Hou, Shengping Kijlstra, Aize Yang, Peizeng |
author_sort | Jiang, Yanni |
collection | PubMed |
description | Several modulatory factors in the TLR signaling pathway including IRF3, IRF7, IRF8, TRIM20, MYD88 and NF-κB1 have been associated with autoimmune disease. In this study, we investigated the association of 13 SNPs for these genes with Behçet’s disease (BD) and Vogt-Koyanagi-Harada (VKH) syndrome using a polymerase chain reaction restriction fragment length polymorphism (PCR-RFLP) assay. Haplotype and linkage disequilibrium (LD) analysis were performed by Haploview4.2. IRF8 mRNA expression and cytokine production was tested by real-time PCR and ELISA. Two SNPs near IRF8 were associated with BD (for rs17445836 GG genotype, Pc = 9.56 × 10(−8), OR = 2.044; for rs11642873 AA genotype, Pc = 9.24 × 10(−7), OR = 1.776). No significant association was found for the 13 SNPs tested with VKH syndrome. Haplotype analysis of the two positive SNPs revealed that the AG haplotype was significantly increased in BD patients (Pc = 2.60 × 10(−8), OR = 1.646). Functional studies revealed an increased mRNA expression of IRF8 and IFN-γ production and a decreased production of IL-10 in rs17445836 carriers with the GG genotype. Increased expression of IRF8 as well as IFN-γ production and a decreased production of IL-10 were found in individuals carrying the rs11642873/AA genotype. In conclusion, this study indicates that IRF8 may contribute to the genetic susceptibility of BD by regulating IRF8 expression and cytokine production. |
format | Online Article Text |
id | pubmed-4726413 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-47264132016-01-27 Two Genetic Variations in the IRF8 region are associated with Behçet’s disease in Han Chinese Jiang, Yanni Wang, Hong Yu, Hongsong Li, Lin Xu, Dengfeng Hou, Shengping Kijlstra, Aize Yang, Peizeng Sci Rep Article Several modulatory factors in the TLR signaling pathway including IRF3, IRF7, IRF8, TRIM20, MYD88 and NF-κB1 have been associated with autoimmune disease. In this study, we investigated the association of 13 SNPs for these genes with Behçet’s disease (BD) and Vogt-Koyanagi-Harada (VKH) syndrome using a polymerase chain reaction restriction fragment length polymorphism (PCR-RFLP) assay. Haplotype and linkage disequilibrium (LD) analysis were performed by Haploview4.2. IRF8 mRNA expression and cytokine production was tested by real-time PCR and ELISA. Two SNPs near IRF8 were associated with BD (for rs17445836 GG genotype, Pc = 9.56 × 10(−8), OR = 2.044; for rs11642873 AA genotype, Pc = 9.24 × 10(−7), OR = 1.776). No significant association was found for the 13 SNPs tested with VKH syndrome. Haplotype analysis of the two positive SNPs revealed that the AG haplotype was significantly increased in BD patients (Pc = 2.60 × 10(−8), OR = 1.646). Functional studies revealed an increased mRNA expression of IRF8 and IFN-γ production and a decreased production of IL-10 in rs17445836 carriers with the GG genotype. Increased expression of IRF8 as well as IFN-γ production and a decreased production of IL-10 were found in individuals carrying the rs11642873/AA genotype. In conclusion, this study indicates that IRF8 may contribute to the genetic susceptibility of BD by regulating IRF8 expression and cytokine production. Nature Publishing Group 2016-01-22 /pmc/articles/PMC4726413/ /pubmed/26794091 http://dx.doi.org/10.1038/srep19651 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Jiang, Yanni Wang, Hong Yu, Hongsong Li, Lin Xu, Dengfeng Hou, Shengping Kijlstra, Aize Yang, Peizeng Two Genetic Variations in the IRF8 region are associated with Behçet’s disease in Han Chinese |
title | Two Genetic Variations in the IRF8 region are associated with Behçet’s disease in Han Chinese |
title_full | Two Genetic Variations in the IRF8 region are associated with Behçet’s disease in Han Chinese |
title_fullStr | Two Genetic Variations in the IRF8 region are associated with Behçet’s disease in Han Chinese |
title_full_unstemmed | Two Genetic Variations in the IRF8 region are associated with Behçet’s disease in Han Chinese |
title_short | Two Genetic Variations in the IRF8 region are associated with Behçet’s disease in Han Chinese |
title_sort | two genetic variations in the irf8 region are associated with behçet’s disease in han chinese |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4726413/ https://www.ncbi.nlm.nih.gov/pubmed/26794091 http://dx.doi.org/10.1038/srep19651 |
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