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Parasail: SIMD C library for global, semi-global, and local pairwise sequence alignments

BACKGROUND: Sequence alignment algorithms are a key component of many bioinformatics applications. Though various fast Smith-Waterman local sequence alignment implementations have been developed for x86 CPUs, most are embedded into larger database search tools. In addition, fast implementations of N...

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Detalles Bibliográficos
Autor principal: Daily, Jeff
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4748600/
https://www.ncbi.nlm.nih.gov/pubmed/26864881
http://dx.doi.org/10.1186/s12859-016-0930-z